Pairwise Alignments

Query, 438 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 443 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  296 bits (757), Expect = 1e-84
 Identities = 162/273 (59%), Positives = 211/273 (77%)

Query: 164 ADSFEAQVMGLVQSVSGASGDLQTTARWLSSGAAEAADQAVTVAAAAGQATSNVETVASA 223
           AD FE +V GLV SV+ ++G +++TA+ +++ A E + Q+ TVAAAA +AT N++TVA+A
Sbjct: 170 ADVFEQEVKGLVASVAASAGQMESTAQTMTATAEETSRQSTTVAAAAEEATVNIQTVAAA 229

Query: 224 AEELSASVSEISRQMADSARISTAASEEAARTNAMVQGLATAANKIGEVVKLINDIASQT 283
           AEELS+S++EISRQ++ SA+I+  A  EA RTN MVQ LA AA+KIG+VVKLINDIASQT
Sbjct: 230 AEELSSSITEISRQVSHSAQIAAGAMVEADRTNQMVQSLAEAASKIGQVVKLINDIASQT 289

Query: 284 NLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTGRATDEIGLQIAAVQEETRKTVEAI 343
           NLLALNATIEAARAG+AGKGFAVVA EVK+LANQTG+AT+EI  QI+AVQ  TR  V AI
Sbjct: 290 NLLALNATIEAARAGDAGKGFAVVANEVKSLANQTGKATEEIAAQISAVQSATRDAVTAI 349

Query: 344 KGIAATIEQVRENASGIASAVEQQGAATREIARNVEQAATGTRQVSQNIDSISNNATEAV 403
            GIA TI Q+ + +S IA+AVE+QGAAT EIARNV+QAA GT +V++ I  ++  A E  
Sbjct: 350 GGIATTIGQINQISSSIAAAVEEQGAATGEIARNVQQAAQGTSEVTETITRVNAAAAETG 409

Query: 404 KGAGQVLTSADGLATSSQNLRDAVTRFLAEVRS 436
             A QVL +A  L+  S  L   V RF++++R+
Sbjct: 410 TAARQVLDAASTLSRDSNQLETQVDRFVSQIRA 442



 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 29/130 (22%), Positives = 55/130 (42%)

Query: 153 EARRREDTQRFADSFEAQVMGLVQSVSGASGDLQTTARWLSSGAAEAADQAVTVAAAAGQ 212
           EA R  D  +       +V  L      A+ ++      + S   +A      +A   GQ
Sbjct: 299 EAARAGDAGKGFAVVANEVKSLANQTGKATEEIAAQISAVQSATRDAVTAIGGIATTIGQ 358

Query: 213 ATSNVETVASAAEELSASVSEISRQMADSARISTAASEEAARTNAMVQGLATAANKIGEV 272
                 ++A+A EE  A+  EI+R +  +A+ ++  +E   R NA      TAA ++ + 
Sbjct: 359 INQISSSIAAAVEEQGAATGEIARNVQQAAQGTSEVTETITRVNAAAAETGTAARQVLDA 418

Query: 273 VKLINDIASQ 282
              ++  ++Q
Sbjct: 419 ASTLSRDSNQ 428



 Score = 41.6 bits (96), Expect = 5e-08
 Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 8/166 (4%)

Query: 262 LATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEAGKGFAV-VAGEVKNLANQTGR 320
           L    + + +   L  D+A+   +    A I A   G     F   V G V ++A   G+
Sbjct: 131 LVQVLSAVNKAAFLDMDLATSVYIETNTAAIIARELGAKADVFEQEVKGLVASVAASAGQ 190

Query: 321 ATDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGIASAVEQQGAATREIARNVE- 379
                    A  +E +R++      +AA  E+   N   +A+A E+  ++  EI+R V  
Sbjct: 191 MESTAQTMTATAEETSRQSTT----VAAAAEEATVNIQTVAAAAEELSSSITEISRQVSH 246

Query: 380 --QAATGTRQVSQNIDSISNNATEAVKGAGQVLTSADGLATSSQNL 423
             Q A G    +   + +  +  EA    GQV+   + +A+ +  L
Sbjct: 247 SAQIAAGAMVEADRTNQMVQSLAEAASKIGQVVKLINDIASQTNLL 292