Pairwise Alignments

Query, 438 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 807 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  269 bits (688), Expect = 2e-76
 Identities = 171/366 (46%), Positives = 235/366 (64%), Gaps = 9/366 (2%)

Query: 72  VVKSWSERLHPDDVATALGAFTNCLSGRSAVKDSYDVSYRLKRKDGAYHWFRAMGGVNRD 131
           V+ SW   L    + T L A T  ++  S    + D+  R +R D      +AM  + ++
Sbjct: 310 VLLSW---LIARSIVTPLSAMTGAMTELSKGNKTVDIPAR-ERTDEIGAMAQAME-IFKE 364

Query: 132 GAGKATRMCGSLIDIDAERV-SEARRREDTQRFADSFEAQVMGLVQSVSGASGDLQTTAR 190
              K  +M     + +A++V +EA R+      AD+FE  V  +VQ+V+ A+ +LQ  + 
Sbjct: 365 NTLKMDKMQA---EQEAQKVKAEADRKAALHHMADTFEESVGKVVQTVTSAATELQGASS 421

Query: 191 WLSSGAAEAADQAVTVAAAAGQATSNVETVASAAEELSASVSEISRQMADSARISTAASE 250
            ++  A E + QA TVA+AA QA++NVETVA+A EEL+AS+SEI++Q+  S  ++  A +
Sbjct: 422 QMAGTAHETSAQATTVASAATQASANVETVAAATEELAASISEIAKQVERSQAVANRAEQ 481

Query: 251 EAARTNAMVQGLATAANKIGEVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGE 310
           EA  T   V+ L+    +IGEVV LINDIA+QTNLLALNATIEAARAG+AGKGFAVVA E
Sbjct: 482 EAENTTNQVRALSDNVGRIGEVVVLINDIAAQTNLLALNATIEAARAGDAGKGFAVVANE 541

Query: 311 VKNLANQTGRATDEIGLQIAAVQEETRKTVEAIKGIAATIEQVRENASGIASAVEQQGAA 370
           VKNLANQT +ATDEI  QI AVQE T   V+AI  I+  I ++ E ++ +ASAV++Q AA
Sbjct: 542 VKNLANQTAKATDEIASQIKAVQEGTGNAVKAIDTISKVISEMGEISASVASAVQEQTAA 601

Query: 371 TREIARNVEQAATGTRQVSQNIDSISNNATEAVKGAGQVLTSADGLATSSQNLRDAVTRF 430
           T EIARNVEQAA GT +VS NI+S+   A E    A Q+  SA  L+  ++ LR  V RF
Sbjct: 602 TGEIARNVEQAAAGTAEVSSNINSVEQAARETGHAAEQISESATDLSKQAEFLRGEVGRF 661

Query: 431 LAEVRS 436
           L +VR+
Sbjct: 662 LHQVRA 667