Pairwise Alignments

Query, 538 a.a., Type I secretion outer membrane protein, TolC (NCBI) from Rhodospirillum rubrum S1H

Subject, 444 a.a., peptidase from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 80/339 (23%), Positives = 141/339 (41%), Gaps = 13/339 (3%)

Query: 150 LQQNIFRGLRTVAQTDQAKAQVQSERALLRSVEQTVLLNAAQAYFNVIRDQAVLELNINN 209
           LQQ +F      A   +  AQ        R   Q +L+     Y   +  Q  +++    
Sbjct: 98  LQQPLF-DYEAYANYRKGVAQALFADESFRDKSQALLVRVLTYYTQALFAQDQIDIARAK 156

Query: 210 EQVLRRQLDAANDRFRVGEITRTDVAQADSRLAGAIADRIQAEGTLESSRANYTQVVGHP 269
           ++   +Q       F+ GE TRTD+ +A+SR   A A+ IQA    ++S      ++G  
Sbjct: 157 KKAFEQQFQQNQHLFQQGEGTRTDILEAESRYELATAEEIQALDEQDASLRELGALIGVQ 216

Query: 270 PENIQPPPP-------YARLPQTLEDGLNTALSANPDVIAALYVWRQAQAAIRDQRGKLL 322
             NI    P       +   P   +     A+S NP + +       A+  +   R   L
Sbjct: 217 SVNIHDLAPLNQGFAAFTLTPANYDTWHELAISNNPTLASQRQALEVARYEVERNRAGHL 276

Query: 323 PTLNAEVSYSFSHNPSATT---EYDTKTFQAGLNLTVPLYQGGAVYSQIRDAKHRAGQRR 379
           P + A  S     + S  T    YDT T   G+ +++PLY GG + +  R A     Q  
Sbjct: 277 PKVTAYASSRQQESDSGNTYNQRYDTNTI--GVEVSLPLYAGGGISASTRQASRAMEQAE 334

Query: 380 LQVDEQREAVIESLTSAWETLTSARARVSSYKSQIEAAGIALDGVQREAQVGSRTVLDVL 439
            +++ +    +  L   +    S  +++ +Y+  + +A   +   Q+    G R  LD L
Sbjct: 335 YELEGKTRETLIELRRQFSACLSGVSKLRAYQKALVSAEALVVSTQQSILGGERVNLDAL 394

Query: 440 DAEQELLTSRVNLVRAERDSAISTYEVLAALGAMTAEDL 478
           +AEQ+L ++R +L +A  D  ++  ++    G +   DL
Sbjct: 395 NAEQQLYSTRRDLAQARYDYLMAWTKLHYYAGNLRDTDL 433



 Score = 32.3 bits (72), Expect = 4e-05
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 22/181 (12%)

Query: 73  SPVMAETFDEALVSAYQANPTLQARRALLRAVDEQVPQALSDWRPQVSVQGSTFYQQMDY 132
           +P   +T+ E  +S    NPTL ++R  L     +V +  +   P+V+   S+  Q+ D 
Sbjct: 236 TPANYDTWHELAISN---NPTLASQRQALEVARYEVERNRAGHLPKVTAYASSRQQESD- 291

Query: 133 EPGRKNLDNRPATLGVVLQQNIFRGLRTVAQTDQA-KAQVQSERALLRSVEQTVL----- 186
                N      T+GV +   ++ G    A T QA +A  Q+E  L     +T++     
Sbjct: 292 SGNTYNQRYDTNTIGVEVSLPLYAGGGISASTRQASRAMEQAEYELEGKTRETLIELRRQ 351

Query: 187 -------LNAAQAYFNVIRDQAVLELNINNEQVL---RRQLDAANDRFRVGEITRTDVAQ 236
                  ++  +AY   +     L ++   + +L   R  LDA N   ++   TR D+AQ
Sbjct: 352 FSACLSGVSKLRAYQKALVSAEALVVS-TQQSILGGERVNLDALNAEQQLYS-TRRDLAQ 409

Query: 237 A 237
           A
Sbjct: 410 A 410