Pairwise Alignments

Query, 538 a.a., Type I secretion outer membrane protein, TolC (NCBI) from Rhodospirillum rubrum S1H

Subject, 423 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 39/410 (9%)

Query: 51  KLMIKPVSIAVASLLVAGLGLSSPVMAETFD--EALVSAYQANPTLQARRALLRAVDEQV 108
           K  + P  IA    +++GL ++   +A++    +AL +A  ANP L A R  +   D   
Sbjct: 11  KTPVSPWKIAALCAVISGL-MAPAALAQSISLPQALSTAMDANPDLAAARQEIGIADGAR 69

Query: 109 PQALSDWRPQVSVQGSTFYQQMDYEPGRKNLDNRPATLGVVLQQNIFRGLRT-VAQTDQA 167
            QA     P +S          D E  R+N      +L   L+    RG R  VA   Q 
Sbjct: 70  KQAGLIPNPTISY---------DVEDTRRNTSQTTVSLSQTLELGGKRGARVDVATYGQT 120

Query: 168 KAQVQSERALLRSVEQTVLLNAAQAYFNVIRDQAVLELNINNEQVLRRQLDAANDRFRVG 227
            AQ++ +R +       +  +  QA++  +R Q  L+L   + ++  R L   + R R G
Sbjct: 121 AAQLELDRRV-----NGLRADVVQAFYAALRAQTGLDLAKQSLELTERGLRIVDGRVRAG 175

Query: 228 EITRTDVAQADSRLAGAIADRIQAEGTLESSRANYTQVVGHPP---ENIQPPPPYARLPQ 284
           + +  +  +A  +LA A     +AE    ++     Q+ G      + ++ P     LP 
Sbjct: 176 KSSPVEATRAQVQLAEAQLQVRRAETEKATAYQQLAQITGSSVTVFDRLESPTLSPGLPP 235

Query: 285 TLEDGLNTALSANPDVIAALYVWRQAQAAIRDQRGKLLPTLNAEVSYSFSHNPSATTEYD 344
             ED L   L    ++  A+    ++ A++  ++ + +P  N  VS    ++ S     +
Sbjct: 236 RTED-LLAKLDQTAEMRQAVVQIDKSDASLGSEKAQRIP--NLTVSVGSQYDRSVRERVN 292

Query: 345 TKTFQAGLNLTVPLYQGGAVYSQIRDAKHRAGQRRLQVDEQREAVIESLTSAWETL---- 400
           T     GL++ +PL+        I  A  RA Q R    +QR AV   L +  +T     
Sbjct: 293 T----VGLSMPLPLFDRN--QGNILSASRRADQAR----DQRNAVELRLRTETQTALNQW 342

Query: 401 TSARARVSSY-KSQIEAAGIALDGVQREAQVGSRTVLDVLDAEQELLTSR 449
           ++A   V SY K+ + +A  A++   R  ++G    ++VLDA++ L+ +R
Sbjct: 343 STAMQEVESYDKTILPSAQQAVETATRGFEMGKFGFIEVLDAQRTLIVAR 392