Pairwise Alignments

Query, 879 a.a., Valyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

Subject, 948 a.a., valine--tRNA ligase from Pseudomonas putida KT2440

 Score =  931 bits (2407), Expect = 0.0
 Identities = 487/954 (51%), Positives = 625/954 (65%), Gaps = 84/954 (8%)

Query: 2   LDKTYSAADVEERLYTRWENAGGFAAHPDSPAQPYTIMMPPPNVTGSLHMGHALTFTLQD 61
           +DKTY    +E   Y  WE+   FA  P    + YTIM+PPPNVTGSLHMGH     + D
Sbjct: 1   MDKTYQPHAIETSWYNTWESENYFA--PQGAGESYTIMIPPPNVTGSLHMGHGFNNAIMD 58

Query: 62  TLIRYHRMSGRDALWQPGSDHAGIATQMVVERQLAGKGITRHDLGREAFISKVWEWKAHS 121
            LIR+ RM GRD LWQPG+DHAGIATQM+VERQL  KG  RHDLGRE F+ KVWEWK  S
Sbjct: 59  ALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLEAKGQNRHDLGREKFLEKVWEWKDQS 118

Query: 122 GGTIQRQLRRLGASPDWPRERFTMDDGLSKAVRKVFVRLHKDGLIYRDKRLVNWDPVLHT 181
           GG I RQ+RRLG+S DW RERFTMDDGLS+AV++ FVRLH+DGLIYR KRLVNWD  LHT
Sbjct: 119 GGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHT 178

Query: 182 AISDLEVEQRETKGKLWHLRYPV-DGQKGR----FIVVATTRPETMLGDTAVAVHPEDER 236
           AISDLEVE  + KG LW+LRYP+ DG K      ++VVATTRPET+LGD AVAV+P DER
Sbjct: 179 AISDLEVENHDEKGHLWNLRYPLADGAKTAEGQDYLVVATTRPETLLGDAAVAVNPNDER 238

Query: 237 FKDLIGQFVMLPLAHRRIPIIADDYADPTKGSGAVKITPAHDFNDFEVGRRHNLPMINIL 296
           ++ LIG+FV LPL  RRIPIIADDY DP  G+G VKITPAHDFND+EVG+RHNLP++NI 
Sbjct: 239 YQALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIF 298

Query: 297 DMNA---------KLNGNV--------PQAYQGLDRFVARDKVIAEFEALDLLEKIEDNP 339
           D NA          L+G+V        P  Y  LDRFVAR +++A+ +A  LL  I+D+ 
Sbjct: 299 DKNAFVLSSAQAFNLDGSVNEQVDTQLPAQYANLDRFVARKQIVADLDAQGLLVSIDDHA 358

Query: 340 MTQPYGDRSGVIIEPWLTDQWFVDAAKLAVEPIRAVEEGRTRFVPKHWENTFFEWMRNIQ 399
           +  P GDRSG +IEPWLTDQW+V    LA   I AVE+GR +FVPK +EN +F WMR+IQ
Sbjct: 359 LKVPKGDRSGTVIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDIQ 418

Query: 400 PWCISRQIWWGHQVPAWYGPDGTIFVEETEDEARTAAHDHYGVATELTRDTDVLDTWFSS 459
            WCISRQ+WWGH++PAWY   G ++V   E+E R  A    G    L +D DVLDTWFSS
Sbjct: 419 DWCISRQLWWGHRIPAWYDEAGQVYVGRNEEEVR--AKHKLGADVVLRQDDDVLDTWFSS 476

Query: 460 ALWPFSTLGWPDQTPELARYYPGDVLVTGFDIIFFWVARMMMMGHYVMGD------VPFR 513
            LW FSTLGWP+QT  L +++  DVLVTGFDIIFFWVARM+M+  +++ +      VPF+
Sbjct: 477 GLWTFSTLGWPEQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFK 536

Query: 514 DVYIHALVRDEKGQKMSKSKGNVIDPLDMTD----------------------------- 544
            VY+H LVRD +GQKMSKSKGNV+DPLD+ D                             
Sbjct: 537 TVYVHGLVRDGQGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTK 596

Query: 545 --------QYGTDALRFTLIAMAAQGRDIKMSEQRVAGYRNFCTKLWNAARFC--QMNDC 594
                    YGTDALRFT  ++A+ GRDIK    RV GYRNFC K+WNAAR+   +  DC
Sbjct: 597 AEFPEGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVLDKGEDC 656

Query: 595 LPQ-PVFDPTTARHTLNRWIGAKTEDCAAKVAEAIEAYRFNDAAQVAYGFVWNTFCDWYL 653
                 ++ + A    +RWI ++ +   A+V   +E +RF+ A+Q  Y F+WN +CDWYL
Sbjct: 657 GQNGEAYELSLA----DRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCDWYL 712

Query: 654 EMAKPILQGEDG-VTKAE-TQAMAAWVLDTILHILHPMMPFITEELWEKIAAREG----Q 707
           E++KP+L  E+  V +A  T+     VL+  L + HP MPFITEE+W++IA   G     
Sbjct: 713 ELSKPVLWDENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGIDGKT 772

Query: 708 LITAAWP-KGQGLAAPEAEAEMDWVVGVVSAVRSVRAEMNVPPGARIPLVIKGATAVTLA 766
           ++   WP   +      AE +++W+  ++  +R++RAEMN+ PG  +PL +K A A    
Sbjct: 773 IMLQPWPVANEARIDAAAEGDIEWLKELMVGLRNIRAEMNIGPGKPLPLFLKNANADDQR 832

Query: 767 RIETHRPLLASLARLESIEV-SDTVPSQGAAQVVVGEATLVLPLAGVIDLDRERARLGKE 825
           R++ +  LL  LA++ES  V  D   +  +A  +VG+  +++P+AG+ID D E ARL KE
Sbjct: 833 RLQENEALLKKLAKVESFTVLGDADEAPLSATALVGDLQVLVPMAGLIDKDAELARLNKE 892

Query: 826 LLRLDGEVARIDKKLSNPAFMAKAPDEVVEEQRERRAEYESQRDKVRDALTRIA 879
           + RL GEV R+  KLSN AF+ KAP  V+E++R + AE E       +   RIA
Sbjct: 893 IQRLQGEVQRVGGKLSNTAFVDKAPPAVIEKERAKLAESEQALANFTEQHARIA 946