Pairwise Alignments

Query, 371 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 377 a.a., ABC-type multidrug transport system, permease component from Enterobacter asburiae PDN3

 Score =  178 bits (451), Expect = 2e-49
 Identities = 117/372 (31%), Positives = 194/372 (52%), Gaps = 10/372 (2%)

Query: 6   RLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWE 65
           R++AL VKE   I+RDP   +I +V PLL LF+F Y   L+     + +L         +
Sbjct: 10  RVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQQSEEALD 69

Query: 66  LVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDI-EAGRPATVQILLD 124
               + G+P I    I+    ++   +   ++   + I   F+ ++  A   A +Q++ D
Sbjct: 70  FTHAMTGSPYIDAT-ISDSRQELIQKMQAGKIRGLIVIPVDFAANMARANTDAPIQVITD 128

Query: 125 GRRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAPT-VIARSWFNPNLLSQWAMVPGLV 183
           G   N A  V GY   I      +    R  E K    V  R WFNP  +SQ  ++PG V
Sbjct: 129 GSEPNTANFVQGYAEGIWQLWQMQRAEDRGEEFKPLIDVQTRYWFNPAAISQHFIIPGAV 188

Query: 184 AIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAFLVV 243
            II  + G ++T+L IARE E GT + L+ + +   E+L  K+IP   +G+  +   ++V
Sbjct: 189 TIIMTVIGAILTSLVIAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLAMLLCMLV 248

Query: 244 SIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQ----QQAILGAFMLMVPMV 299
           S+F+  +P+RGSL VL+  + ++L + +G+GL IS ++  Q    Q A+  AF+   P +
Sbjct: 249 SVFILGVPYRGSLVVLFFITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFL---PSI 305

Query: 300 LLSGFASPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTL 359
           +LSGF   ID+MP  ++ +T + P RY++  ++ LFL       +I N + L A AV+ +
Sbjct: 306 MLSGFIFQIDSMPAVIRAVTYVIPARYFVSTLQSLFLAGNIPVVLIVNTLFLMASAVMFI 365

Query: 360 GAAAWLFRRRME 371
           G      +RR++
Sbjct: 366 GLTWMKTKRRLD 377