Pairwise Alignments

Query, 371 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 368 a.a., putative multidrug ABC transporter permease YbhR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  300 bits (769), Expect = 3e-86
 Identities = 157/365 (43%), Positives = 232/365 (63%), Gaps = 1/365 (0%)

Query: 6   RLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWE 65
           RL  LI KE  ++LR+P+ R ILI+P L+Q+ +F +A TLEV NA I + + D+G    E
Sbjct: 4   RLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVE 63

Query: 66  LVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLDG 125
           L QR         +L+   P ++R  ID Q+ L  V     FSR ++  + A +Q++LDG
Sbjct: 64  LTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDG 123

Query: 126 RRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAPTVIARSWFNPNLLSQWAMVPGLVAI 185
           R SN+AQI A YL QIV +   E   G+     +  V+ R+W+NPNL  +W +VP L+A+
Sbjct: 124 RNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVV-RNWYNPNLDYKWFVVPSLIAM 182

Query: 186 IALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAFLVVSI 245
           I  +  ++VT+LS+ARERE GT DQL+VSPL T +I  GK +P +++     T  L + I
Sbjct: 183 ITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIGI 242

Query: 246 FVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVLLSGFA 305
           + ++IPF GSL + Y + V+Y  ++VG GL IS+L  TQQQA +G F+ M+P +LLSG+ 
Sbjct: 243 WAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYV 302

Query: 306 SPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLGAAAWL 365
           SP++NMP WLQ LT ++P+R++  I K ++LKD +L  V  ++ PL  I   T  AA  +
Sbjct: 303 SPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAYAM 362

Query: 366 FRRRM 370
           FRR++
Sbjct: 363 FRRKV 367