Pairwise Alignments

Query, 371 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 377 a.a., putative multidrug ABC transporter permease YbhS from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  184 bits (467), Expect = 3e-51
 Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 12/373 (3%)

Query: 6   RLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWE 65
           R++AL VKE   I+RDP   +I +V PLL LF+F Y   L+     + +L         +
Sbjct: 10  RVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALD 69

Query: 66  LVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIE-AGRPATVQILLD 124
               + G+P I    I+ +  ++ A +   ++   V I   F+  +E A   A +Q++ D
Sbjct: 70  FTHTMTGSPYIDAT-ISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITD 128

Query: 125 GRRSNAAQIVAGYLNQI--VADLAAETPRGRRTEAKAPTVIARSWFNPNLLSQWAMVPGL 182
           G   N A  V GY+  I  +  +      G+  E     V  R WFNP  +SQ  ++PG 
Sbjct: 129 GSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLID-VQTRYWFNPAAISQHFIIPGA 187

Query: 183 VAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAFLV 242
           V II  + G ++T+L +ARE E GT + L+ + +   E+L  K+IP   +G+  +   ++
Sbjct: 188 VTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCML 247

Query: 243 VSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQ----QQAILGAFMLMVPM 298
           VS+F+  +P+RGSL +L+  S ++L + +G+GL IS ++  Q    Q A+  AF+   P 
Sbjct: 248 VSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFL---PS 304

Query: 299 VLLSGFASPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVT 358
           ++LSGF   ID+MP  ++ +T + P RY++  ++ LFL       ++ NV+ L A AV+ 
Sbjct: 305 IMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMF 364

Query: 359 LGAAAWLFRRRME 371
           +G      +RR++
Sbjct: 365 IGLTWLKTKRRLD 377