Pairwise Alignments

Query, 266 a.a., exodeoxyribonuclease III xth (NCBI) from Rhodospirillum rubrum S1H

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score =  246 bits (629), Expect = 3e-70
 Identities = 135/265 (50%), Positives = 167/265 (63%), Gaps = 12/265 (4%)

Query: 2   VSIATFNVNSVKARLPNLLDWLGTRSPDVALLQEIKCLDEAFPRAEIEALGYRLAVHGQK 61
           + IATFN+N +++RLP LL WL    PD+A LQE+K  D+ FPRAE+EA GY    HGQ 
Sbjct: 4   LKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHHGQP 63

Query: 62  AYNGVAILSRL--PLSEVTARLPGLDGAPAEDDDQARYLEAVVDGRFRVCCLYLPNGNPV 119
           ++NGVAIL R   PL EV   LPGL     E+D Q+RYLEA   G   V CLYLPNGNP+
Sbjct: 64  SWNGVAILVRGSDPL-EVRRGLPGL-----EEDSQSRYLEAAAHGVL-VACLYLPNGNPL 116

Query: 120 EEDRKFGYKLAWMDRLIVRATHLMRDFPDTPVILGGDFNVCPDDLDVYDPAGWANDALCR 179
               KF YKL W + LI  A  L       P +L GDFNV P D+D+Y+P  W  DAL +
Sbjct: 117 PGP-KFDYKLHWFECLIQHARSLQES--GHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQ 173

Query: 180 PETRQRFRALVFLGYTDALRALNPGAPLFTFWDYQAGAWQKDHGLRIDHLLLNPAAADRL 239
           PE+R  ++ L+  G+ DA+R L P   ++TFWDY    W ++ GLRIDHLLLN   A  L
Sbjct: 174 PESRACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYL 233

Query: 240 SAAGVDRATRGHAKSSDHAPSWVTL 264
             AGVD   R  AK+SDHAP W+ L
Sbjct: 234 KRAGVDAWVRNQAKASDHAPVWIEL 258