Pairwise Alignments

Query, 452 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  378 bits (970), Expect = e-109
 Identities = 205/410 (50%), Positives = 268/410 (65%), Gaps = 10/410 (2%)

Query: 23  NVPKLIKESLITAALAAVLFLPFIALHATSSGAGLFIEQRWETWGWSVLTVFIGRIALVI 82
           ++ + + E+++   LA ++F P + +     G     E R     W V  V +GR  L +
Sbjct: 18  DLKRSLLETIVAGLLALIVFGPVVGV--VLDGYTFNAEPR--RVAWLVGGVMVGRFLLSL 73

Query: 83  WRDN-PSNRLHDALLK--SVVMPVGGFFRRNMAFIGLAALVLAIVFPITPFSNRYYVDVA 139
           +    P  R+        S V      ++  + +I  A +V+AIVFPI  F+N+Y + V 
Sbjct: 74  FLQTAPGQRMLLGFDSGGSGVHVTAPDYKSRLRYIIPALIVIAIVFPI--FANKYLLTVV 131

Query: 140 TTWMIYIMLGWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSQTFGWSFWVCLPLAGVFA 199
              +IY++LG GLNIVVGLAGLLDLGYVAFYA+GAY  AL  Q  G  FW  LPLA + A
Sbjct: 132 ILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLPLAAIAA 191

Query: 200 AFFGVVLGFPVLRLRGDYLAIVTLGFGEIIRVVLLNWYAVTNGPDGISGIERPSFFGLDF 259
           A  G +LGFPVLR+ GDYLAIVTLGFGEIIR+VL NW + T GP+G+     P+FFGL+F
Sbjct: 192 ALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPA-PSPTFFGLEF 250

Query: 260 ARTAPEGGETFHQFFGISYSPDHRVIFLFYLILALAVLTNIFTGRIRRLPVGRAWEALRE 319
            R A +GG   H+FFG  Y+   + +F++ ++  + +       R+ R+PVGRAWEALRE
Sbjct: 251 GRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALRE 310

Query: 320 DEIACRSLGINPTNVKLSAFALGAMFGGFAGSFFATRQGFISPESFTFMESAVILAIVVL 379
           DEIACRS+G+N   VKLSAF LGA   G AG FFAT QGF++P SFTF ESA+ILAIVVL
Sbjct: 311 DEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVL 370

Query: 380 GGMGSQIGVVIAAFFLVVLPEVFREFDQFRMFFFGAAMVAVMVWRPRGLL 429
           GGMGS +GVVIAAF L V PE+ R F ++R+  FG  MV +M+WRPRGL+
Sbjct: 371 GGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVLMMIWRPRGLI 420