Pairwise Alignments

Query, 314 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

 Score =  272 bits (695), Expect = 8e-78
 Identities = 145/288 (50%), Positives = 191/288 (66%), Gaps = 26/288 (9%)

Query: 24  VLLEVDHLTMRFGGLVAIDDLSFVAHNREITSIIGPNGAGKTTVFNCLTGFYKPTVGRLT 83
           ++L VD+L M+FGG+ A+ D+S      +I ++IGPNGAGKTTVFNCLTGFYK + GR+ 
Sbjct: 5   IILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIE 64

Query: 84  LH----------------------HPQK-QRTFYLERMEGFRVAQQAHVGRTFQNIRLFG 120
           L+                       P +     Y +   G  +  +A + RTFQNIRLF 
Sbjct: 65  LNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLFK 124

Query: 121 QMSVLENLIVAQHNALMSASKFSLAGLLNLPVYRRAERIAIERAAYWLDRVGLTARADWD 180
           +MSV+ENL+VAQH   M  ++  LAG+LN   YR+AE  A++ A YWL+ V L   A+  
Sbjct: 125 EMSVVENLLVAQH---MWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANRL 181

Query: 181 AQNLPYGDQRRLEIARAMCTEPVVLCLDEPAAGLNPRESLDLNDLLRAIRDEHGIGLLLI 240
           A  L YG QRRLEIARAMCT P ++CLDEPAAGLNP+E+  L+ ++R +RDEH I ++LI
Sbjct: 182 AGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLI 241

Query: 241 EHDMSVVMGISDHIVVLDHGRKIADGDPKSVREDPAVIKAYLGEEEDE 288
           EHDM +VM ISDHIVVLDHG  IA+G P+ +R +P VI AYLG +E+E
Sbjct: 242 EHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEEE 289