Pairwise Alignments

Query, 703 a.a., ATP-dependent DNA helicase RecG (NCBI) from Rhodospirillum rubrum S1H

Subject, 692 a.a., junction-specific ATP-dependent DNA helicase from Pseudomonas putida KT2440

 Score =  452 bits (1162), Expect = e-131
 Identities = 299/681 (43%), Positives = 392/681 (57%), Gaps = 24/681 (3%)

Query: 12  PLTSLKGAGKTMAPLIARLIGGDKVVDLLWHLPSGLVDR-RFSPLIAEAPDGVVVTLTVV 70
           P+T LKG G+ MA  +A+ +G + + D+L+HLP    DR R  P+    P    V   VV
Sbjct: 8   PVTVLKGVGEAMAEKLAK-VGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIEGVV 66

Query: 71  VEAHQEPPPRSPSPYRVVCRDASGFVTLVFFHGRARYLNDLLPVGETRVISGKVERFGGA 130
             A      R     R+   D SG +TL F+H  +    + L  G      G+       
Sbjct: 67  SGADVTMGKRRSLVVRL--GDGSGVLTLRFYHF-SNAQKEGLKRGTHLRCYGEARPGASG 123

Query: 131 PQIVHPTHVVPLAEAEAVCRVE----PVYPLSGGVAGKVLARLIAQALDDIPDPAAWPDE 186
            +I HP +   L   E    VE    P+YP + G+  + L  L  Q+L  +  P + PD 
Sbjct: 124 LEIYHPEYRA-LNGNEPPPPVEQTLTPIYPSTEGLTQQRLRLLCQQSLA-LLGPRSLPD- 180

Query: 187 WIDAPLKAREGWPGWIDALRAVHAPEEAEDL----RPDHPARRRLAYDELLATQLALLLV 242
           W+   L          +A+R +H P    DL       H A+ RLA++ELL  QL+   +
Sbjct: 181 WLPDELARDYQLAPLDEAIRYLHNPPADADLDELAEGQHWAQHRLAFEELLTHQLSQQRL 240

Query: 243 RRAARTVRGRPIVGTGALRAKVLAALPFALTGAQSRSLAEIDGDMASPARMLRLLQGDVG 302
           R + R++R   +     L+A+ LA L F  TGAQ R   EI  D++    M+RL+QGDVG
Sbjct: 241 RESLRSLRAPVLPRATRLQAQYLANLGFQPTGAQQRVANEIAYDLSQHEPMMRLVQGDVG 300

Query: 303 SGKTVVALLTMLTAVEAGAQAALMAPTEILARQHIETLAPLCASAGVRLGLLTGRDKGRA 362
           +GKTVVA L  L A+EAG Q ALMAPTEILA QH  T        G+ +  L G+ KG+A
Sbjct: 301 AGKTVVAALAALQALEAGYQVALMAPTEILAEQHYITFKRWLEPLGIEVAWLAGKLKGKA 360

Query: 363 RAALLEALAAGEIDILVGTHALFQDDVVFAALAVVVVDEQHRFGVHQRLALSDKGRAVDV 422
           RAA LE +A G   ++VGTHALFQ++V F  LA+ ++DEQHRFGV QRLAL  KG A ++
Sbjct: 361 RAASLEQIANGA-PMVVGTHALFQEEVRFKHLALAIIDEQHRFGVQQRLALRRKGVAGEL 419

Query: 423 ----LVMTATPIPRTLTLTHYGDMDISRLDEKPPGRLPADTRVLPIDRLDDVIAAVARAI 478
               L+MTATPIPRTL ++ Y D+D S LDE PPGR P +T ++   R  +V+  V  A 
Sbjct: 420 CPHQLIMTATPIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRRFEVVERVRAAC 479

Query: 479 DGGAKVYWVCPLIEDSETGDMAAAVDRQALLADRLGPRLGPRVGLVHGRMKPGEKDAVME 538
             G + YWVC LIE+SE     AA      L   LG     +VGL+HGRMKP EK  +M 
Sbjct: 480 AEGRQAYWVCTLIEESEELTCQAAESTYEELGSALGEL---KVGLIHGRMKPAEKAEIMA 536

Query: 539 AFSGNGLDLLVATTVIEVGVNVPSATVMVIEHAERFGLAQLHQLRGRIGRGGGRSTCLLL 598
            F    L LLVATTVIEVGV+VP+A++M+IE+ ER GLAQLHQLRGR+GRG   S C+LL
Sbjct: 537 EFKAGNLQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLL 596

Query: 599 YAPPLGETARARLETMRRTDDGFEIAEEDLRLRGAGEVLGTRQSGLPVFRLIDPLLAEDL 658
           Y PPL +  R RL  MR T+DGF IAE+DL LRG GE+LGTRQ+GL  F++ D +   DL
Sbjct: 597 YHPPLSQIGRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDADL 656

Query: 659 LAIARKQAEVIVETDPDLAGP 679
           L   R  A+ +V   P+   P
Sbjct: 657 LPAVRDAAQALVSRWPEHVSP 677