Pairwise Alignments

Query, 500 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 439 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

 Score =  300 bits (768), Expect = 7e-86
 Identities = 182/448 (40%), Positives = 252/448 (56%), Gaps = 43/448 (9%)

Query: 10  AANRLTALSTSMALIEFDLDGTILAANTNFLTVMGYRLDEVRGKKHSLFVEPAERDSAEY 69
           A  +L A+  SMA+IEF  DGTIL AN  F   MGY  DE+RGK H LF EP    SAEY
Sbjct: 23  AQAKLAAIGRSMAMIEFAPDGTILDANERFCQAMGYSADELRGKHHRLFCEPDYAKSAEY 82

Query: 70  RAFWDQLRRGTFLAREFKRVGKGGKEIWLEASYNPILGLGGKPTGVLKIATDITRKKAEA 129
           +  W +L +G  ++  F+R+ K G+E+WLEASY P+L    + T V+K+A+DIT++  + 
Sbjct: 83  QQLWRELGQGKAISGTFERIDKAGREVWLEASYMPVLDEHRQVTSVIKVASDITQRVVQE 142

Query: 130 VELQEKVAAISRSQAVIEFAMDGTILTANENFLKTMGYRLEDIQGKNHSLFIAPGERDSA 189
            E +  + AISRS AVIEF   G ++ AN+NFL TMGYRL+++ G++H LF    ER+SA
Sbjct: 143 HESESLLKAISRSMAVIEFTPQGRVIKANQNFLDTMGYRLDEVVGRHHGLFCLAHERESA 202

Query: 190 EYRQFWDILRRGEFQARQFMRIGKGGRVVWLEASYNPILNLDGKPYKVVKFATDISGRKE 249
           +YR+FW  L RGE+ + +F R+ K G+ V+LEASYNPI +  G+  KVVKFA+DI+    
Sbjct: 203 QYREFWASLNRGEYHSHRFERVNKQGQTVFLEASYNPIFDSKGRLCKVVKFASDIT---- 258

Query: 250 ENAALAKQFETGVKATVETVASSAGKMQNTAQAMAAAAEQTSQQSSIVSTAAEELGTSVS 309
                                      Q   Q  AA A   +  SS+ + A    GT V 
Sbjct: 259 --------------------------HQVCTQQSAAHA---AHASSVQTDACARKGTEV- 288

Query: 310 EIARQIAQATRVTDDAVAETKASEKLVGELVTAADKIGAVSQLIADIASQTNLLALNATI 369
                + QA +V +    E   + + +  +   +D IG +   I  IA QTNLLALNA I
Sbjct: 289 -----VQQAVQVIEQISQELNDAARSIDAVNRQSDVIGQIVLTIRGIADQTNLLALNAAI 343

Query: 370 EAARAGDAGKGFAVVASEVKSLANQTAKATEEIEQQVSGIQDSS----RATASAIRQIGL 425
           EAARAG+ G+GFAVVA EV++LA +T+KAT EI   V    D S     +  S++ + G 
Sbjct: 344 EAARAGEHGRGFAVVADEVRNLAARTSKATLEIVDVVRQNHDLSLLAVASMQSSLNRTGH 403

Query: 426 VIAQVSEISASISGAAEEQAAATREVSQ 453
            +A  +E    I    +        +SQ
Sbjct: 404 GVALANEAGTVIMEIQQGSRHVVDAISQ 431



 Score =  120 bits (302), Expect = 7e-32
 Identities = 104/376 (27%), Positives = 172/376 (45%), Gaps = 25/376 (6%)

Query: 121 DITRKKAEAVELQEKVAAISRSQAVIEFAMDGTILTANENFLKTMGYRLEDIQGKNHSLF 180
           +I R +    + Q K+AAI RS A+IEFA DGTIL ANE F + MGY  ++++GK+H LF
Sbjct: 12  EIQRTRQALADAQAKLAAIGRSMAMIEFAPDGTILDANERFCQAMGYSADELRGKHHRLF 71

Query: 181 IAPGERDSAEYRQFWDILRRGEFQARQFMRIGKGGRVVWLEASYNPILNLDGKPYKVVKF 240
             P    SAEY+Q W  L +G+  +  F RI K GR VWLEASY P+L+   +   V+K 
Sbjct: 72  CEPDYAKSAEYQQLWRELGQGKAISGTFERIDKAGREVWLEASYMPVLDEHRQVTSVIKV 131

Query: 241 ATDISGR---KEENAALAKQFETGVKATVETVASSAGKM-QNTAQAMAAAAEQ-TSQQSS 295
           A+DI+ R   + E+ +L K     +     T      K  QN    M    ++   +   
Sbjct: 132 ASDITQRVVQEHESESLLKAISRSMAVIEFTPQGRVIKANQNFLDTMGYRLDEVVGRHHG 191

Query: 296 IVSTAAEELGTSVSEIARQIAQATRVTD-----DAVAETKASEKLVGELVTAADKIGAVS 350
           +   A E       E    + +    +      +   +T   E     +  +  ++  V 
Sbjct: 192 LFCLAHERESAQYREFWASLNRGEYHSHRFERVNKQGQTVFLEASYNPIFDSKGRLCKVV 251

Query: 351 QLIADIASQ--TNLLALNATIEAARAGDAGKGFAVVASEVKSLANQTAKATEEIEQQVSG 408
           +  +DI  Q  T   A +A   ++   DA       A +   +  Q  +  E+I Q+++ 
Sbjct: 252 KFASDITHQVCTQQSAAHAAHASSVQTDA------CARKGTEVVQQAVQVIEQISQELND 305

Query: 409 IQ---DSSRATASAIRQIGLVIAQVSEISASISGAAEEQAAATREVSQNI----NGVEQA 461
                D+    +  I QI L I  +++ +  ++  A  +AA   E  +      + V   
Sbjct: 306 AARSIDAVNRQSDVIGQIVLTIRGIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNL 365

Query: 462 AAQTGRSSTELLSVAQ 477
           AA+T +++ E++ V +
Sbjct: 366 AARTSKATLEIVDVVR 381