Pairwise Alignments
Query, 500 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H
Subject, 446 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440
Score = 237 bits (605), Expect = 6e-67
Identities = 146/406 (35%), Positives = 217/406 (53%), Gaps = 36/406 (8%)
Query: 15 TALSTSMALIEFDLDGTILAANTNFLTVMGYRLDEVRGKKHSLFVEPAERDSAEYRAFWD 74
++L + M +++ D G I N NF + M YR +++ G+ V + Y+
Sbjct: 33 SSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRNIEDIVPAHVKSLDFYQRMKS 92
Query: 75 QLRRGTFLAREFKRVGKGGKEIWLEASYNPILGLGGKPTGVLKIATDITRKKAEAVELQE 134
+ RG L F+ + G+E WL + P+ G+ ++D+TR + E +
Sbjct: 93 AISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGRIKYFTLHSSDLTRTIETSREHES 152
Query: 135 KVAAISRSQAVIEFAMDGTILTANENFLKTMGYRLEDIQGKNHSLFIAPGERDSAEYRQF 194
+ A+ RS AVIEF +DG ILTAN+ FL T+GYRLE I+GK+H +F P E +SA Y+ F
Sbjct: 153 LIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSAGYQAF 212
Query: 195 WDILRRGEFQARQFMRIGKGGRVVWLEASYNPILNLDGKPYKVVKFATDISGRKEENAAL 254
W+ LRRGE+ A +F RI GRV+WLEASYNPI + YKVVKFAT I+ + + A+
Sbjct: 213 WERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITDQVNQELAV 272
Query: 255 AKQFETGVKATVETVASSAGKMQNTAQAMAAAAEQTSQQSSIVSTAAEELGTSVSEIARQ 314
A+ A A TS + + + A E+ T + R
Sbjct: 273 AE--------------------------AADVAYNTSLGTDVSARKATEVVTQTVTVMRG 306
Query: 315 IAQATRVTDDAVAETKASEKLVGELVTAADKIGAVSQLIADIASQTNLLALNATIEAARA 374
+ + + D + +++G ++ + I+DIA QTNLLALNA IEAARA
Sbjct: 307 LEASMQEAADGIQALDTQSRVIGSII----------KTISDIAGQTNLLALNAAIEAARA 356
Query: 375 GDAGKGFAVVASEVKSLANQTAKATEEIEQQVSGIQDSSRATASAI 420
G+ G+GFAVVA EV+ LA++T+ ATEEI + V + ++A S I
Sbjct: 357 GEQGRGFAVVADEVRQLASRTSTATEEIARVVQQNEQLAQAAVSII 402
Score = 122 bits (306), Expect = 3e-32
Identities = 61/121 (50%), Positives = 81/121 (66%)
Query: 14 LTALSTSMALIEFDLDGTILAANTNFLTVMGYRLDEVRGKKHSLFVEPAERDSAEYRAFW 73
+ AL S A+IEFDLDG IL AN FL +GYRL+++RGK H +F EP E +SA Y+AFW
Sbjct: 154 IKALMRSTAVIEFDLDGIILTANDRFLATVGYRLEQIRGKHHRMFCEPQEVNSAGYQAFW 213
Query: 74 DQLRRGTFLAREFKRVGKGGKEIWLEASYNPILGLGGKPTGVLKIATDITRKKAEAVELQ 133
++LRRG ++A FKR+ G+ IWLEASYNPI V+K AT IT + + + +
Sbjct: 214 ERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDAHDVLYKVVKFATVITDQVNQELAVA 273
Query: 134 E 134
E
Sbjct: 274 E 274
Score = 58.2 bits (139), Expect = 6e-13
Identities = 76/404 (18%), Positives = 152/404 (37%), Gaps = 32/404 (7%)
Query: 117 KIATDITRKKAEAVELQEKVAAISRSQAVIEFAMDGTILTANENFLKTMGYRLEDIQGKN 176
K+ +I + + + + +++ +++ V++ G I N NF M YR E + G+N
Sbjct: 13 KLKQEIRQLREDLMSIEQVKSSLDSEMLVLQLDPQGRIEMVNGNFESEMLYRAEQLLGRN 72
Query: 177 HSLFIAPGERDSAEYRQFWDILRRGEFQARQFMRIGKGGRVVWLEASYNPILNLDGKPYK 236
+ + Y++ + RGE F + G+ WL + P+ N +G+
Sbjct: 73 IEDIVPAHVKSLDFYQRMKSAISRGEHLNGAFRLLRGNGQEAWLRSILQPVKNSEGR--- 129
Query: 237 VVKFATDISGRKEENAALAKQFETGVKATVETVASSAGKMQN-----TAQAMAAAAEQTS 291
+K+ T S +++ E+ +KA + + A + + +A +
Sbjct: 130 -IKYFTLHSSDLTRTIETSREHESLIKALMRSTAVIEFDLDGIILTANDRFLATVGYRLE 188
Query: 292 Q----------QSSIVSTAAEELGTSVSEIARQIAQATRVTD--DAVAETKASEKLVGEL 339
Q + V++A + IA+ + D V +AS + +
Sbjct: 189 QIRGKHHRMFCEPQEVNSAGYQAFWERLRRGEYIAERFKRIDAHGRVIWLEASYNPIFDA 248
Query: 340 VTAADKIGAVSQLIADIASQTNLLALNATIEAARAGDAGKGFAVVASEVKSLANQTAKAT 399
K+ + +I D +Q +A A + A + G V A + + QT
Sbjct: 249 HDVLYKVVKFATVITDQVNQELAVAEAADV----AYNTSLGTDVSARKATEVVTQTVTVM 304
Query: 400 EEIEQQVSGIQDSSRATASAIRQIGLVIAQVSEISASISGAAEEQAAATREVSQNING-- 457
+E + D +A + R IG +I +S+I+ + A A + G
Sbjct: 305 RGLEASMQEAADGIQALDTQSRVIGSIIKTISDIAGQTNLLALNAAIEAARAGEQGRGFA 364
Query: 458 -----VEQAAAQTGRSSTELLSVAQSMSHQADDLETRVDAFLRK 496
V Q A++T ++ E+ V Q A + +D R+
Sbjct: 365 VVADEVRQLASRTSTATEEIARVVQQNEQLAQAAVSIIDTSKRQ 408