Pairwise Alignments

Query, 500 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 655 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  192 bits (487), Expect = 4e-53
 Identities = 115/280 (41%), Positives = 169/280 (60%), Gaps = 28/280 (10%)

Query: 247 RKEENAALAKQFETGVKATVETVASSAGKMQNTAQAM--------------AAAAEQTSQ 292
           R+E    L   F   V+  + TV++S  +++  A+++              AAAAEQ S 
Sbjct: 280 RQEAIERLTADFNQSVEGVLHTVSTSTSQLRLAAESLTHVADGTSRNASSVAAAAEQASV 339

Query: 293 QSSIVSTAAEELGTSVSEIARQIAQATRVTDDAVAETKASEKLVGELVTAADKIGAVSQL 352
               V+ AAEE+  S  EIA Q++++T++ + A  +    +++V  L  A  +IGA++ +
Sbjct: 340 NVETVAAAAEEMSASQGEIAAQVSRSTQIAERAANDVHHIDEIVQGLSVATGRIGAIAGI 399

Query: 353 IADIASQTNLLALNATIEAARAGDAGKGFAVVASEVKSLANQTAKATEEIEQQVSGIQDS 412
           I DIASQTNLLALNATIEAARAG+AGKGFAVVA+EVK+LANQTAKATEEI   +  +QD 
Sbjct: 400 INDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTAKATEEIGVHIQAVQDV 459

Query: 413 SRATASAIRQIGLVIAQVSEISASISGAAEEQAAATREVSQN--------------INGV 458
           SR TA A+R IG  IA V E +++I+ A EEQ+AAT E+++N              I  V
Sbjct: 460 SRETAEAVRAIGETIATVHETASAIATAVEEQSAATHEIARNVHEASIGTRSVTETITEV 519

Query: 459 EQAAAQTGRSSTELLSVAQSMSHQADDLETRVDAFLRKVR 498
              A  TG S+ ++ + A  ++ +  +L + +  FL+ +R
Sbjct: 520 SAGAGTTGDSAQQVFATANDLNTRTAELASDIKDFLQALR 559