Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 389 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

 Score =  247 bits (630), Expect = 5e-70
 Identities = 140/373 (37%), Positives = 212/373 (56%), Gaps = 18/373 (4%)

Query: 13  LAAGLLTAMPAQAFETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERLK 72
           +AA  + A P    E  AR  L++D+  + +L  KD D P+ P+S++KLMTAY++F+ L+
Sbjct: 22  IAAAQVPAPP----EIAARSYLLLDVTANQILAQKDIDSPVEPASLTKLMTAYVVFDALR 77

Query: 73  SGSLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVVAE 132
           +  +SL  T  VS+ AW+  G     S MF++P  QV V DL++G+I+QSGNDA V +AE
Sbjct: 78  TKKISLTQTLPVSQRAWKMPG-----SRMFIDPKMQVPVEDLIKGLIVQSGNDATVALAE 132

Query: 133 NLAGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPEFY 192
            + G    F   MN +AK LG+ N+ + N  GL  P H  TA DL +LA  ++RDFPE  
Sbjct: 133 GVGGTVEHFVEMMNAQAKVLGMKNTTYKNPEGLTTPGHTTTARDLSILATRLVRDFPEEA 192

Query: 193 EIYGETKFTYNGIV---QHNRNPLLYMNMGADGLKTGHTNIAGFGLTASAVQD------G 243
           + Y   K+ Y G       NRN LL+ +   DGLKTGHT+ AG+ + A+A +D      G
Sbjct: 193 KYYAIKKYRYPGTPSTNDTNRNMLLFRDPTVDGLKTGHTDAAGYCMIATAKRDFPNLTGG 252

Query: 244 RRLLMVINGLQSNKERSEEAERLMSWGFRNFETVTLLKAGQPISDADVWMGEEETVPLVS 303
           RRLL ++ G  S   R+ E+++L++WG+  ++ V L  AGQP +   VW G++ T+ L  
Sbjct: 253 RRLLSIVLGATSETVRANESQKLLNWGYTAYDAVRLFDAGQPAATPAVWKGKDNTLKLGR 312

Query: 304 VNDLKITLPRAARRDMVAKAVFETPIPAPIQAGDRIATLVLTGPDMAKLEYPLVAGRAVE 363
              + + +P  +   +  +     P+ AP     ++ +L +T  +    + PLVA  AVE
Sbjct: 313 PEAIVVAVPAGSASKIKTQVSRPDPLVAPFTKFQQVGSLKVTLDEQPVADVPLVALEAVE 372

Query: 364 QLSFFGRILASAR 376
           Q   FGR   + R
Sbjct: 373 QAGVFGRAWDAVR 385