Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 413 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

 Score =  264 bits (675), Expect = 3e-75
 Identities = 148/356 (41%), Positives = 213/356 (59%), Gaps = 11/356 (3%)

Query: 15  AGLLTAMPAQAFETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERLKSG 74
           AG   A+PA+A+       L++D D+  VL   + D P+PP+S++K+MT++++ + L+SG
Sbjct: 58  AGGPPALPAKAW-------LLMDFDSGEVLASANPDEPLPPASLTKMMTSFLVEQALRSG 110

Query: 75  SLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVVAENL 134
            L  DD  SVS+NAW +G +    S M+L   +Q  V D++RGII+QSGNDA   +AE++
Sbjct: 111 KLKKDDLVSVSQNAWCRGSSTE--SCMYLPLNSQATVIDILRGIIVQSGNDASKAIAEHM 168

Query: 135 AGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPEFYEI 194
           AG E  FA  MN  A+ LG+T++HFVN+TGLPDP+H  +A DL +LA  IIRD  E+Y I
Sbjct: 169 AGTEEGFAKLMNAEAQRLGMTHTHFVNSTGLPDPDHKSSARDLAILARAIIRDSSEYYPI 228

Query: 195 YGETKFTYNGIVQHNRNPLLYMNMGADGLKTGHTNIAGFGLTASAVQDGRRLLMVINGLQ 254
           Y E +F YNGI Q NRN LLY +   DGLKTGHT  AGF L  S+ ++G RL+ VI    
Sbjct: 229 YAEREFKYNGIKQGNRNALLYTDPTVDGLKTGHTQEAGFCLVTSSKRNGMRLITVILNTN 288

Query: 255 SNKERSEEAERLMSWGFRNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDLKITLPRA 314
           S + R++E   L+ WG+ NFE  T +++   ++  +V  G+ +TV         +T+PR 
Sbjct: 289 SAQARADETRALLGWGYGNFEKATPIQSNTVVTTTNVRFGKADTVAAGLGAPWTVTVPRG 348

Query: 315 ARRDMVAKAVFETPIPAPIQAGDRIATLVLTGPDMAKLEYPLVAGRAVEQLSFFGR 370
            +  +         + AP+  G  I  +V      A  E PLVA   VE+  F  R
Sbjct: 349 QK--VNTSVQINPKLEAPVAKGAVIGKVVAESNGKAVGEAPLVAQADVERAGFMLR 402