Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 388 a.a., D-alanyl-D-alanine carboxypeptidase from Enterobacter asburiae PDN3

 Score =  243 bits (620), Expect = 7e-69
 Identities = 134/341 (39%), Positives = 198/341 (58%), Gaps = 3/341 (0%)

Query: 34  LVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERLKSGSLSLDDTFSVSENAWRKGG 93
           +++D  T  +L   +      P+S++KLMT Y++   + S  ++ DD  +V  +AW KG 
Sbjct: 40  VLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKGN 99

Query: 94  AA-SGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVVAENLAGDEATFAAAMNRRAKEL 152
               G S MFL  G +V V DL RG+I+ SGNDACV +A+++AG +  F   MN   ++L
Sbjct: 100 PVFDGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADHVAGGQPQFVKMMNDYVQKL 159

Query: 153 GLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPEFYEIYGETKFTYNGIVQHNRNP 212
            L ++HF    GL  P  + +A+DL +L+  II   PEFY +Y E   T+NGI Q NRN 
Sbjct: 160 NLRDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNG 219

Query: 213 LLY-MNMGADGLKTGHTNIAGFGLTASAVQDGRRLLMVINGLQSNKERSEEAERLMSWGF 271
           LL+   M  DGLKTGHT+ AGF L ASAV   RRL+ V+ G  S K R ++A +L+ WG 
Sbjct: 220 LLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSPKGREDQARKLLHWGQ 279

Query: 272 RNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDLKITLPRAARRDMVAKAVFE-TPIP 330
           +NF+TV +L +G+ +    +W G++E V L +  D  + LP+A   ++ AK V +   + 
Sbjct: 280 QNFDTVQILHSGKKVGTERIWYGDKEQVKLGTDQDFWLALPKAEVPNIKAKYVLDKKELE 339

Query: 331 APIQAGDRIATLVLTGPDMAKLEYPLVAGRAVEQLSFFGRI 371
           API A  R+  + L   D     +PLV   AV++   F R+
Sbjct: 340 APIAAHQRVGEIQLYDRDKVVAHWPLVTLEAVDKGGLFSRM 380