Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 403 a.a., D-alanyl-D-alanine carboxypeptidase DacA from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  247 bits (631), Expect = 4e-70
 Identities = 133/346 (38%), Positives = 202/346 (58%), Gaps = 3/346 (0%)

Query: 30  ARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERLKSGSLSLDDTFSVSENAW 89
           A   ++ID ++  VL +++ADV   P+S++K+MT+Y++ + +K+G     D  ++  +AW
Sbjct: 46  AESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAW 105

Query: 90  RKGGAA-SGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVVAENLAGDEATFAAAMNRR 148
             G     G S MFL PG QV V  L+RGI +QSGNDACV +A+  AG +  F   MN  
Sbjct: 106 ATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSY 165

Query: 149 AKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPEFYEIYGETKFTYNGIVQH 208
              LGL N+HF    GL     Y +A D+ L+ + +IRD P  Y IY E +FT+NGI Q 
Sbjct: 166 VNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQL 225

Query: 209 NRNPLLYMN-MGADGLKTGHTNIAGFGLTASAVQDGRRLLMVINGLQSNKERSEEAERLM 267
           NRN LL+ N +  DG+KTGHT+ AG+ L ASA +   RL+  + G ++ K R  E+++L+
Sbjct: 226 NRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLL 285

Query: 268 SWGFRNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDLKITLPRAARRDMVAKAVF-E 326
           +WGFR FETV  LK G+  +   VW G+ +   L    D+ +T+PR   +D+ A  V   
Sbjct: 286 TWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNS 345

Query: 327 TPIPAPIQAGDRIATLVLTGPDMAKLEYPLVAGRAVEQLSFFGRIL 372
           + + AP+Q    + T+          + PLV  + + + +FFG+I+
Sbjct: 346 SELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKII 391