Pairwise Alignments

Query, 374 a.a., DNA-directed DNA polymerase (NCBI) from Rhodospirillum rubrum S1H

Subject, 691 a.a., DNA polymerase III, gamma subunit from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 31/234 (13%)

Query: 15  PRLTADLLGHEAAEREILETCASGRAAHAWLISGPRGIGKATLAFRFARFALAGGLEGGE 74
           PR   +++G     + ++    + R  HA+L +G RG+GK T+A   A+          E
Sbjct: 12  PRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAKCLNC------E 65

Query: 75  GGLFGALAPASLAMDPAHPVFRRVAAGSHGDLRVIERGLAEGTGGRRRGEIVIGDVRDLG 134
            G+     P          V R +  G   DL  IE   A  T         + D R+L 
Sbjct: 66  TGITST--PCGTCS-----VCREIDEGRFVDL--IEIDAASRTK--------VEDTRELL 108

Query: 135 GFMRMTPSEGGWRVVIVDGAEDMNRNAANALLKGLEEPPGRALLLLVSHNPARLLPTIRS 194
             ++  PS G ++V ++D    ++ ++ NALLK LEEPP     +L + +P +L  TI S
Sbjct: 109 DNVQYAPSRGRFKVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILS 168

Query: 195 RCRRLALRPLEPAVLA-----TLIERSLPELAETERPGLIG-LAEGSIGRAMDL 242
           RC + +L+ + P  +       L   ++P   E +   L+G  A+GS+  AM L
Sbjct: 169 RCLQFSLKNMSPERVVEHLSHVLAAENVP--FEEDALWLLGRAADGSMRDAMSL 220