Pairwise Alignments

Query, 418 a.a., Small GTP-binding protein domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 16/168 (9%)

Query: 192 PVVALVGYTNSGKSTLFNRLTAGGVLAKDMLFATLDPTMRSLDLP----SGRKVILSDTV 247
           PV+ALVG  N GKST+FNRLT      +D +   L    R          GR  IL DT 
Sbjct: 3   PVIALVGRPNVGKSTMFNRLTK----TRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTG 58

Query: 248 GFVSDLPHELVAAFRATLEEVKAADVIVHVRDIAGIDSDAQKADVEVVLREMELDERVES 307
           G   D           +L  ++ AD ++ +     +D+ A     + ++ E  L +R ++
Sbjct: 59  GITGDEVGMDEKMAEQSLMAIEEADYVLFL-----VDARAGMTAADQMIAE-HLRKRNKA 112

Query: 308 GLIEALNKIDLLDSERQAQLVEDTAGRDTLVPVSAVTGAGTDALLARI 355
            ++ A NKID +D +  A+      G    +PV+   G G +AL+  +
Sbjct: 113 AILVA-NKIDNIDPD-VARAEFSPMGMGNAIPVAGSQGRGINALMEAV 158



 Score = 40.8 bits (94), Expect = 9e-08
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 32/194 (16%)

Query: 184 EARARVPYPV------VALVGYTNSGKSTLFNRLTAGGVLAKDMLFATLDP--TMRSLDL 235
           E   R+P P       +A++G  N GKSTL NR+     L ++ +    +P  T  S+ +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRM-----LGEERVVVYDEPGTTRDSIYI 233

Query: 236 P---SGRKVILSDTVGF-VSDLPHELVAAFRA--TLEEVKAADVIVHVRDIAGIDSDAQK 289
           P    G K    DT G       HE V  F    TL+ +K A+V++ V        DA++
Sbjct: 234 PFERDGEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFV-------MDARE 286

Query: 290 ADVEVVLREMELDERVESGLIEALNKIDLLDSERQAQLVEDTAGRDTLVP------VSAV 343
             V+  L  +         ++ ALNK D ++   +A +  +   R   V       +SA+
Sbjct: 287 GVVDHDLNLLGFALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISAL 346

Query: 344 TGAGTDALLARIDA 357
            G G   L   + A
Sbjct: 347 HGTGVGNLYKSVQA 360