Pairwise Alignments

Query, 261 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  142 bits (359), Expect = 6e-39
 Identities = 86/244 (35%), Positives = 129/244 (52%), Gaps = 4/244 (1%)

Query: 12  LRLAGIALSLGALIGLWHLAFVLAGARPYLLPSPWQTAQALIGRWPTILPHAGTTALEIV 71
           LR+    L    L+G+W LA +      YL+PSP    + L+   P +L     T     
Sbjct: 15  LRIVSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPMLLGALWMTLKITF 74

Query: 72  LGLGLGTLLGALSALTIALSPLMRRMLLPLLVISQAIPVFAIAPLLVLWLGYGLASKVAM 131
           L   L  ++G L+A     S ++   L P  ++ Q  PV AIAPL+++W      + V  
Sbjct: 75  LSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVIC 134

Query: 132 ATLVIYFPVTTAFLDGLRRTEPGWLDLARTMGASPLSTLLRIRLPAALPALASGLRVATA 191
           ATLV  FP+    + GLR   PG L+L     AS    LLR+R+P+ALP   +GLR+A+ 
Sbjct: 135 ATLVAIFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFFAGLRIASG 194

Query: 192 VAPIGAVVGEWV----GSSAGLGYLMLHANARMQIDLMFAALFVLTVFSLGLYALVDRTL 247
           +A IGAVV E+V    G+ AGL Y +L A  ++ I  +FAAL ++ +  + L++L+    
Sbjct: 195 LALIGAVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVALFSLMALLA 254

Query: 248 RAAL 251
           R +L
Sbjct: 255 RLSL 258