Pairwise Alignments

Query, 261 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 534 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  103 bits (256), Expect = 1e-26
 Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 2/224 (0%)

Query: 15  AGIALSLGALIGLWHLAFVLAGARPYLLPSPWQTA-QALIGRWPTILPHAGTTALEIVLG 73
           A + L L  L+ LW L+  L    P +LP+P Q    AL      +L     +   +V G
Sbjct: 32  APVLLPLVVLL-LWTLSSQLGWMPPQILPAPSQVMITALTLLQSDLLGQLLISLHRLVNG 90

Query: 74  LGLGTLLGALSALTIALSPLMRRMLLPLLVISQAIPVFAIAPLLVLWLGYGLASKVAMAT 133
           L  G L G L    +  S    R+L P +     IP     PL ++  G     K+A+  
Sbjct: 91  LAAGVLAGTLLGALMGASVRAERLLYPTVYALAQIPTLGWIPLFMVLFGIDDGLKLAVLI 150

Query: 134 LVIYFPVTTAFLDGLRRTEPGWLDLARTMGASPLSTLLRIRLPAALPALASGLRVATAVA 193
             +  PVT     G+R   P  LD+ART+   PL+ L R+ LPAALP   +GLR+A + A
Sbjct: 151 KAVIVPVTLHSQRGVRDVPPALLDVARTLRLPPLTRLTRLILPAALPVWFTGLRLALSQA 210

Query: 194 PIGAVVGEWVGSSAGLGYLMLHANARMQIDLMFAALFVLTVFSL 237
            +  +V E + SS G+GYLM+      Q+D++   + V+ +  L
Sbjct: 211 WVSLIVVELLASSQGIGYLMVWGRQLFQLDIVLVCIAVIGLTGL 254



 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 10/246 (4%)

Query: 15  AGIALSLGALIGLWHLAFVLAGARPYLLPSPWQTAQALI-----GRWPTILPHAGTTALE 69
           +G+A+ L  L+ LW LA         LLP P +  +A+      G  P  + H+   AL 
Sbjct: 287 SGLAVPL-LLLALWQLASHRGWVDALLLPPPGEVLRAIWQGVSDGSLPDAMRHSLWRALA 345

Query: 70  IVLGLGLGTLLGALSALTIALSPLMRRMLLPLLVISQAIPVFAIAPLLVLWLGYGLASKV 129
              G  LG   G L+ L + LS     +    L + + + +FA  PL+  W+G     KV
Sbjct: 346 ---GGALGISAGLLAGLALGLSARAEAVCTSTLTLLRQVALFAWLPLITAWVGNDDGGKV 402

Query: 130 AMATLVIYFPVTTAFLDGLRRTEPGWLDLARTMGASPLSTLLRIRLPAALPALASGLRVA 189
               LV +FP+  A   G+ R      ++A+ +    L  L  + LP A PAL +GLR+A
Sbjct: 403 TFIALVAFFPMLVATHRGVHRRSLALQEVAQVLRLPWLRRLRVLILPGAAPALFTGLRLA 462

Query: 190 TAVAPIGAVVGEW-VGSSAGLGYLMLHANARMQIDLMFAALFVLTVFSLGLYALVDRTLR 248
              A +GA+  E+ + S AG+G LM++A   + + L+ + + ++ V    + +L  R  +
Sbjct: 463 MIYAWLGAIGAEYFMSSGAGIGSLMINAQQLLDMPLILSGMLLIGVTGALIDSLGQRLEQ 522

Query: 249 AALPWQ 254
               W+
Sbjct: 523 RMTRWR 528