Pairwise Alignments

Query, 565 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

Subject, 971 a.a., putative K(+)/H(+) antiporter subunit A/B from Pseudomonas putida KT2440

 Score =  147 bits (371), Expect = 2e-39
 Identities = 138/468 (29%), Positives = 212/468 (45%), Gaps = 48/468 (10%)

Query: 10  LLMILGGLMLPLLPKRAQDPLMVFLPLATLWAVWQIA-------DGPMMLVRFLDLVLEP 62
           LL  +G  +  +LP  A++   +   L  L    Q+A        G ++   FL L   P
Sbjct: 8   LLPFVGSCLAAVLPHNARNAESILAGLVALVGTVQVALLYPQVAHGGVIREEFLWL---P 64

Query: 63  VRG-DAVGRL--FASVFSLMAFA-GGLFAL--------KQPRVLERAAALVYAGGAVGCA 110
             G + V R+  FA +FSL+    G L +L        + P     A  L + G  +G  
Sbjct: 65  SLGMNLVLRMDGFAWLFSLLVLGIGALVSLYARYYMSPQDPVPRFFAFFLAFMGAMLGLV 124

Query: 111 LAGDLISLFVFWEIMAVASTLVIWSSDQPAAAKAGMRYALMHL-FGGAVLMAG--IAGHA 167
           ++G+LI L  FWE+ ++ S L+I      A A+ G   ALM    GG  L+ G  + GH 
Sbjct: 125 ISGNLIQLVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLVGALLLGHV 184

Query: 168 IGGGSLD--------VTAMTLDSPANWLILIGVLVNAGAPPFSAWIADAYPEGSFSGSVF 219
           +G   LD        +    L      LILIG L  +   PF  W+  A    +   +  
Sbjct: 185 VGSYDLDKVLAAGHIIRQHALYPVLLPLILIGALTKSAQFPFQFWLPHAMAAPTPVSAYL 244

Query: 220 LSAFTTKTAVMVLIKGFP---GTELLIWI----GLAMVFYGILYALLENDMRRILSYSIV 272
            SA   K  V +L + +P   G+E   WI    G   +  G   A+ +ND++ +L+YS +
Sbjct: 245 HSATMVKAGVFLLARLWPVLSGSEEWFWIVGGAGALTLLLGAFAAMFQNDLKGLLAYSTI 304

Query: 273 NQVGFMVCAVGIGTDMALNGAAAHAFAHILYKALLLMSAGSVLMMTGGKRKCTELGGLYR 332
           + +G +   +G+ + +A   A  H   H  +KA L M+AG ++    G R    L GL R
Sbjct: 305 SHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAG-IIDHESGTRDIRRLSGLIR 363

Query: 333 SMPITTVCGIIGALAISAFPFTSGFVSKSM-IAQGAADQHLVWVWALLQ--AASAGVFLH 389
            +P T    ++ + +++  P  +GF+SK M  A+        WV A L   A  AG F  
Sbjct: 364 LVPYTATLAMVASASMAGVPLMNGFLSKEMFFAETVFISSTAWVEATLPVIATLAGTFSV 423

Query: 390 A-GIKFPWFVFF---QKDSGLRPADPPASMRAAMILLAAACIGLGVFP 433
           A  ++F   VFF    +D    P +PP  MRA + LL   C+ +G+FP
Sbjct: 424 AYALRFTVDVFFGPTAQDLPHTPHEPPRWMRAPVELLVLTCLVVGIFP 471