Pairwise Alignments

Query, 367 a.a., Peptidase M50, putative membrane-associated zinc metallopeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 452 a.a., regulatory intramembrane protein RIP zinc protease from Pseudomonas putida KT2440

 Score =  153 bits (387), Expect = 8e-42
 Identities = 86/230 (37%), Positives = 136/230 (59%), Gaps = 2/230 (0%)

Query: 134 QPHSAPVVGEVIAGSAAAEAGLLAGDRIVAIDGTPIDRFQDVRRVVPLSNGAPLHIDILR 193
           +P   PV+ E+     AA AGL  GD+++A+D   +  +Q V   V     A + + + R
Sbjct: 221 RPAITPVLAEIDPKGPAAAAGLKTGDKLLALDDLAVTEWQQVVDRVRARPDAKVVVRVER 280

Query: 194 DNAPLAV-IALPRMVETDDGLGNKVQVAQLGVKVSLSQADVQRLGPLDALGQAVGQTWQL 252
           D A L + + L R  E    +G  +     G +   +       GPLDA+G+++ +TW +
Sbjct: 281 DGAALELPVTLARKGE-GKAVGGYLGAGVKGGEWPANMLREISYGPLDAVGESLSRTWNM 339

Query: 253 SADTLTYLGQVVRGNRSAEELGGPVRIAQFSGKAAERGVLDLVTFIALLSVNLGLINLFP 312
           S  TL  L +++ G  S + L GP+ IA+ +G +A+ GV D + F+A LS++LG++NL P
Sbjct: 340 SVLTLESLKKMLFGELSVKNLSGPITIAKVAGASAQSGVGDFLNFLAYLSISLGVLNLLP 399

Query: 313 IPMLDGGHLMFYTIEALRGRPLGARAQEYGLRFGLALVLAMMVFATWNDL 362
           IP+LDGGHL+FY +E  RGRPL  R Q +G++ G++LV+ +M+ A  NDL
Sbjct: 400 IPVLDGGHLLFYLVEWARGRPLSDRVQGWGVQIGISLVIGVMLLALINDL 449



 Score =  130 bits (326), Expect = 9e-35
 Identities = 104/309 (33%), Positives = 147/309 (47%), Gaps = 31/309 (10%)

Query: 5   LHTVLSFLVVLTAVVFVHEFGHFLVARLNGVRVEVFSIGFGRELFGFNDRYGTRWRLSLL 64
           L+ ++  LV L  +V  HEFGHF VAR  GV+V  FS+GFG  L  ++DR+GT + ++ +
Sbjct: 6   LYMIIGTLVALGVLVTFHEFGHFWVARRCGVKVLRFSVGFGTPLLRWHDRHGTEFVVAAI 65

Query: 65  PLGGYVRFFGDADETSGTAETTRPLSKAEEAVSFHHKRVGQRFAIVLAGPMANFLFSIVV 124
           PLGGYV+     DE  G       +  A    SF+ K V QR AIV AGP+ANFL +I+ 
Sbjct: 66  PLGGYVKML---DEREG------DVPPALAGQSFNRKSVRQRIAIVAAGPIANFLLAILF 116

Query: 125 FAGLYMTIGQPHSAPVVGEVIAGSAAAEAGLLAGDRIVAIDGTPIDRFQ--DVRRVVPLS 182
           F  L M +G     PV+G V +GS AA AGL AG  IV++DG P + +   +++ V  L 
Sbjct: 117 FWVLAM-LGTQQIRPVIGAVDSGSLAASAGLTAGQEIVSVDGKPTNGWSAVNLQLVRRLG 175

Query: 183 NGAPLHIDILRDNAPLAVIALPRMVETDDGLGNKVQVAQLGVK-----VSLSQADVQRLG 237
               L I +  + A        ++     G      +  LG++     ++   A++   G
Sbjct: 176 ESGTLQIGVRDEGASAERQLQVKLDSWLKGADEPDPIQSLGLRPWRPAITPVLAEIDPKG 235

Query: 238 PLDALGQAVGQ-----------TWQLSADTLTYLGQ---VVRGNRSAEELGGPVRIAQFS 283
           P  A G   G             WQ   D +        VVR  R    L  PV +A+  
Sbjct: 236 PAAAAGLKTGDKLLALDDLAVTEWQQVVDRVRARPDAKVVVRVERDGAALELPVTLARKG 295

Query: 284 GKAAERGVL 292
              A  G L
Sbjct: 296 EGKAVGGYL 304