Pairwise Alignments

Query, 583 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 554 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  234 bits (597), Expect = 7e-66
 Identities = 160/466 (34%), Positives = 246/466 (52%), Gaps = 22/466 (4%)

Query: 130 VLPPRPDLVGKPVVDRGAFLALQAAATRGPGGGRLDYVWPRVKGGPPIPKVSWAMEIKAW 189
           V P R   + K  +DR AF    A       GG   Y  P V G         A E    
Sbjct: 95  VEPERAPKLPKDDIDREAFETKVAVGRFD--GGFYRYSLPIVLG-----VTDGAKEEVCH 147

Query: 190 GALVGTGIFVDDVQAIFWAKLREA------------MLIGGLLSAVAIV--LVSLISRDL 235
               G G+   DV A+  + L  A            +++GG+++ +  V  + +++ R +
Sbjct: 148 ACHGGMGMVDGDVIAVLSSTLSTAESEARLNQVLTWLVVGGVIATILAVFGVRTILKRII 207

Query: 236 SAVLGDIAQRMALISGGQVDIAVPNQDRRDEAGAMARSLEVFRGKVAETEHLRGDQERLK 295
           +  + D+ +RM  ++ G   I VP  DR+DE G +AR+++VF+      + +  + +   
Sbjct: 208 ADPIEDMTERMEQLARGDTSIGVPALDRKDEVGDIARAVQVFKDNTIAKQQMEVEAQAA- 266

Query: 296 ASAEAARKASLVELAKRFEDSVNSVAQAVAKGARTMDENARTMFGLANVTREKASDSSVM 355
           A+A   R   L +L   F+ +V +V  +V+  A+ M + AR+M   A+   EKA+ ++  
Sbjct: 267 AAARDRRMHHLEDLIAAFDKAVTAVLDSVSASAQQMIQTARSMVDSADQALEKANSAARQ 326

Query: 356 SERTNANFQTVASASEQLSASIREIANQTDKARVTSQQAVETADQSADRMAGLVSDAEKI 415
           +   N N  TVASA+E+LS+SI EIA Q   +   +  A + AD    R+ GL   A+KI
Sbjct: 327 ASDANQNVSTVASAAEELSSSISEIAQQVGMSNQVAVSATKEADSVNTRVQGLAGAADKI 386

Query: 416 GAVITLIEAIASQTNLLALNATIEAARAGDAGKGFAVVAHEVKNLSTQTRKATEDIRGQI 475
           GA++ +I  IA QTNLLALNAT+EAARAG+AGKGF VVA EVKNL+ QT  ATEDI  Q+
Sbjct: 387 GAIVEMITGIAEQTNLLALNATVEAARAGEAGKGFNVVASEVKNLARQTVGATEDIASQV 446

Query: 476 ERVRASVSAAASDIATISHVIHDIAEAAGAISAAVEEQGAATKEISRSVQEVLSTSESVS 535
             ++         I  I+  I  +     AI++A+EEQGAAT+EI+R++    S ++ V 
Sbjct: 447 NTIQQETDKTVRAIRGINTTISSMDGITTAIASAIEEQGAATQEIARNIDHAASGTKFVY 506

Query: 536 HDIRTLAEAARETETTAGALRDTAGGLGQAATTLQEKVDGFLGDLR 581
            +I  + +   ET+ +A  +      L + A TL+ +VD FL  +R
Sbjct: 507 ENINAVTQTIHETDQSAKDVLGAVETLQRQAQTLRAEVDRFLQGIR 552