Pairwise Alignments

Query, 209 a.a., ThiJ/PfpI (NCBI) from Rhodospirillum rubrum S1H

Subject, 311 a.a., HTH-type transcriptional regulator CdhR from Xanthobacter sp. DMC5

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)

Query: 1   MDVAILLYDGLTPLDAIGPFDVLGKLPRARVRTVGI--ERGNVHSRGVSLTLHADNALTE 58
           M +AIL YDG++P     P  V G+   A   +V +  +   + + G  L + A + L+ 
Sbjct: 1   MRLAILAYDGISPFMLSTPLAVFGEPFLAGGHSVDVCAQAPRLSATG-GLVIEAPHPLST 59

Query: 59  VNAPDVVVVPGGAGADELAHDPMIRAWLRKVVPTSRAVLSVSTGSLILAGAGVLEGREAT 118
             A DVV++PG   ADE   + ++ A L+        V+ +  G+  LA AG+L GR AT
Sbjct: 60  ARAADVVILPGWRNADEPVPEALV-AELKAADARGALVVGLCLGAFGLAQAGLLNGRRAT 118

Query: 119 THWRALDLLAGFGVRTKPER---IVTDGTITTAATAAAGLDASFLIAERLCGRAVAEAIQ 175
           THW      A      + +     V +G + T+A  AAGLD    +  RL G   A  + 
Sbjct: 119 THWARAQAFAERYPEVRVDAGALFVDEGQMLTSAGIAAGLDCCLHLLARLSGVGEANRVA 178

Query: 176 LLIGYDP-----EPPLAAGDLFKAPAER 198
             +   P     +P + A      PA++
Sbjct: 179 RHLVVAPQRAGAQPQIIARPTIATPADQ 206