Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 674 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  141 bits (355), Expect = 8e-38
 Identities = 142/533 (26%), Positives = 235/533 (44%), Gaps = 57/533 (10%)

Query: 16  VGAVFILTVKGEEAVVARNARNVA----LLTTGFTFLVSLGLWFGFDPAQSGFQFVEKVS 71
           +GA  +L       ++A N +++A    L+  G   L  LGL      A +       + 
Sbjct: 8   LGAFAVLAALPVLTLLAGNRKSLAGSITLVGVGVACLAMLGLAV---TALTVGPIAFDLG 64

Query: 72  WLPDYGINYQMG--VDGISVLFVLLSTFLTPLCILASWTSIT----KRVKEYMVAFLVLE 125
            +P +G+   +   +DG+S +FV+L + L     L S   I     +  + Y V F +  
Sbjct: 65  TVPLFGLTSSLAFTIDGLSAIFVILISVLGTASALYSVGYIAHYPDEDARRYYVPFPLFI 124

Query: 126 TMMVGMFCALDFVVFYVFFEGV-LIPMFLIIGIWGGGRRVYASFKFFLYTLAGSVLMMVA 184
             M+ +    D+  F+  +E + L+  FL+         + A F +F  T   S+ +M+A
Sbjct: 125 AGMLMVATTSDWFCFFFGWEFMTLVSYFLVTFENRDKENLSAGFIYFFMTQLTSMGLMLA 184

Query: 185 MLAMYIEAGTTDIPTL------MSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAH 238
           ++ +    G+T    +      +    P A+   L L  F  FA K  M+P+  WLP AH
Sbjct: 185 IIVLGTWGGSTSFAAVAKTLGALQAENPVALYGLLSL-FFIGFATKAGMFPLGIWLPKAH 243

Query: 239 VEAPTAGSVILAGVLLKMGAYGFLRFSIPMLPLASAD--FAPFIFALSVIGVIYTSLVAL 296
             AP + S +L+GV++K+G YG LR  +  LPL  A   +   I    V+ ++  +L AL
Sbjct: 244 PAAPASVSALLSGVMIKLGIYGMLRIFLWALPLGEATHVWGMVITLFGVLSMLVGTLRAL 303

Query: 297 VQEDMKKLIAYSSIAHMAFVTAG------------IFAVNQMSVEGALYQMLSHGVVSGA 344
            + D K+L+A  SI  M +V  G            +FA   +   G LY +++H      
Sbjct: 304 GEHDCKRLLAQHSIGQMGYVLLGLGLGLTFLGSNPLFAA--LGFLGCLYHLINHACFKSL 361

Query: 345 LFLCVGVVYDRLHTREISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMG- 403
           LF   G +  R  TR++   GGL+  MP  A   +V  ++  G P   GF+ ++L+    
Sbjct: 362 LFFNTGSILYRAGTRDLDSLGGLSAVMPLTAGCALVGALSIAGTPPFNGFVSKWLLYQSA 421

Query: 404 --------VFQISTWVALFIATGVILGAAYMLYLYRRVIFGKLEKEDLKGLLDLNRREVA 455
                   V+ ++  VA+FI  G +  A+++ Y+      G L K  +       R   A
Sbjct: 422 IFGDVSTPVYILAAVVAIFI--GTVTLASFVKYM-GTAYLGTLPKRFVGSGFGCPRSMEA 478

Query: 456 IFAPLLVLVLWMGVYPSTFLDFMHTSVADLVSTYETALTAAGTP-GPDAAASL 507
           +   L V+ L MGV+P          VA L+   + A   AG   GP   ++L
Sbjct: 479 VEVFLAVVCLVMGVFPGPV-------VATLLGVLDPAFAGAGVDLGPSVLSAL 524