Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 510 a.a., NADH-quinone oxidoreductase subunit M from Pseudomonas fluorescens SBW25

 Score =  351 bits (900), Expect = e-101
 Identities = 192/508 (37%), Positives = 302/508 (59%), Gaps = 24/508 (4%)

Query: 6   LLSIITFLPLVGAVFILTVKGEEAVVARNARNVALLTTGFTFLVSLGLW----FGFDPAQ 61
           +L  +  +P +G   +L   GE    A   R +ALLT      + L LW    + F PA 
Sbjct: 2   ILPWLILIPFIGG--LLCWMGER-FGATLPRWIALLTMSLELALGLWLWAHGDYSFAPAP 58

Query: 62  S---GFQFVEKVSWLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYM 118
                F    K  W+  +GIN  + +DG+S+L +LL+  L  L +L SW  I + V  + 
Sbjct: 59  GVDPTFALEFKHVWIQRFGINVHLALDGLSLLMILLTGLLGILSVLCSWKEIQRHVGFFH 118

Query: 119 VAFLVLETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWGGGR------RVYASFKFFL 172
           +  + +   +VG+F ALD  +F+ F+E +L+PM+ +I +WG         R+YA+ KFF+
Sbjct: 119 LNLMWILGGVVGVFLALDLFMFFFFWEMMLVPMYFLIALWGHSSSDGKKTRIYAATKFFI 178

Query: 173 YTLAGSVLMMVAMLAMY-IEAGTTDIPT-----LMSHGFPAAMQTWLWLAMFASFAVKVP 226
           +T A  ++M+VA+L +  +   +T + T     L+        +  L L  F +FAVK+P
Sbjct: 179 FTQASGLIMLVAILGLVLVNFNSTGVITFNYADLLKTKMSLTTEYILMLGFFIAFAVKLP 238

Query: 227 MWPVHTWLPDAHVEAPTAGSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALSVI 286
           + P H+WLPDAH +APTAGSV LAG+LLK  AYG LRF++P+ P ASA+FAP    L +I
Sbjct: 239 VVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLI 298

Query: 287 GVIYTSLVALVQEDMKKLIAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGALF 346
           G+ Y + +A  Q D+K+LIA+SS++HM FV  GI++ +Q++++GA+ QML+HGV + ALF
Sbjct: 299 GIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQLALQGAVIQMLAHGVSAAALF 358

Query: 347 LCVGVVYDRLHTREISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGVFQ 406
           +  G +Y+RLHTR++   GG+   +     + + F  AS+GLPGTG FIGEFLI+MG F 
Sbjct: 359 ILSGQLYERLHTRDMREMGGVWSRIAYLPAISLFFAAASLGLPGTGNFIGEFLILMGAFV 418

Query: 407 ISTWVALFIATGVILGAAYMLYLYRRVIFGKLEKEDLKGLLDLNRREVAIFAPLLVLVLW 466
            + W++    +G++ G+ Y L +  R  FG  + + +  L  ++ RE+ +   L VL+++
Sbjct: 419 QTPWISAIATSGLVFGSVYSLIMIHRAYFGPAKSDTV--LQGMDARELIMVLGLAVLLIY 476

Query: 467 MGVYPSTFLDFMHTSVADLVSTYETALT 494
           +GVYP  FLD    ++  +   + TA +
Sbjct: 477 IGVYPQPFLDTSAATMHGVQQWFGTAFS 504