Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 509 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Enterobacter asburiae PDN3

 Score =  336 bits (862), Expect = 1e-96
 Identities = 183/502 (36%), Positives = 297/502 (59%), Gaps = 29/502 (5%)

Query: 6   LLSIITFLPLVGAVFILTVKGEEAVVARNARNVALLTTGFTFLVSLGLWF--GFDPAQSG 63
           LL  +  +P +G          E    +  R +AL+T G T  + L LW   G+   QS 
Sbjct: 2   LLPWLILIPFIGGFLCWQT---ERFGVKMPRWIALITMGLTLALGLQLWLQGGYSLTQSA 58

Query: 64  ----FQFVEKVSWLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYMV 119
               +Q    + W+P +GI   + +DG+S+L V+L+  L  L +L SW  I K    + +
Sbjct: 59  GIPQWQSEFILPWIPRFGITIHLAIDGLSLLMVVLTGLLGVLAVLCSWREIEKYQGFFHL 118

Query: 120 AFLVLETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWG-----GGRRVYASFKFFLYT 174
             + +   ++G+F A+D  +F+ F+E +L+PM+ +I +WG     G  R+ A+ KFF+YT
Sbjct: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178

Query: 175 LAGSVLMMVAMLAM-YIEAGTTD---------IPTLMSHGFPAAMQTWLWLAMFASFAVK 224
            A  ++M++A+LA+ ++    T          + T MSHG    ++  L L  F +FAVK
Sbjct: 179 QASGLVMLIAILALVFVHHNATGTWTFNYEDLLKTPMSHG----VEYLLMLGFFIAFAVK 234

Query: 225 VPMWPVHTWLPDAHVEAPTAGSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALS 284
           +P+ P+H WLPDAH +APTAGSV LAG+LLK  AYG LRF++P+ P ASA+FAP    L 
Sbjct: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMWLG 294

Query: 285 VIGVIYTSLVALVQEDMKKLIAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGA 344
           VIG+ Y + +A  Q D+K+LIAY+S++HM FV   I+  +Q++ +GA+ QM++HG+ +  
Sbjct: 295 VIGIFYGAWMAFTQYDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354

Query: 345 LFLCVGVVYDRLHTREISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGV 404
           LF+  G +Y+RLHTR++   GGL   +     + M F +A++G+PGTG F+GEF+I+ G 
Sbjct: 355 LFILCGQLYERLHTRDMRMMGGLWSKIKWLPALSMFFAVATLGMPGTGNFVGEFMILFGS 414

Query: 405 FQISTWVALFIATGVILGAAYMLYLYRRVIFGKLEKE-DLKGLLDLNRREVAIFAPLLVL 463
           F++   + +    G++  + Y L +  R  FGK + E   + L  ++ RE+ I   L+VL
Sbjct: 415 FKVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSEIAAQELPGMSLRELFIILLLVVL 474

Query: 464 VLWMGVYPSTFLDFMHTSVADL 485
           ++ +G +P   LD  H+++ ++
Sbjct: 475 LVLLGFFPQPILDTSHSAMGNI 496