Pairwise Alignments

Query, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

Subject, 503 a.a., NADH dehydrogenase I chain M from Agrobacterium fabrum C58

 Score =  665 bits (1716), Expect = 0.0
 Identities = 326/496 (65%), Positives = 394/496 (79%), Gaps = 1/496 (0%)

Query: 1   MNALPLLSIITFLPLVGAVFILTVKGEEAVVARNARNVALLTTGFTFLVSLGLWFGFDPA 60
           M   P+LS +TFLPLVG V +L          RN  NV+LLTT FTF+VSL +W GFD +
Sbjct: 1   MTDWPILSTVTFLPLVGVVLLLLTNENGPYGRRNILNVSLLTTVFTFIVSLFVWIGFDNS 60

Query: 61  QSGFQFVEKVSWLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYMVA 120
             GFQ VEK +W       Y +GVDGIS+LFV+L+TFL P C+LASW SI KRVKEYM+A
Sbjct: 61  NPGFQMVEKHAWFGKIAA-YHLGVDGISMLFVILTTFLMPFCVLASWNSIEKRVKEYMIA 119

Query: 121 FLVLETMMVGMFCALDFVVFYVFFEGVLIPMFLIIGIWGGGRRVYASFKFFLYTLAGSVL 180
           FL+LE +MVG+F ALD V+FYVFFE  LIPMF+IIG+WGG  RVYAS+KFFLYTL GSVL
Sbjct: 120 FLLLEVVMVGVFVALDTVLFYVFFEATLIPMFIIIGVWGGKDRVYASYKFFLYTLLGSVL 179

Query: 181 MMVAMLAMYIEAGTTDIPTLMSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAHVE 240
            M+A++AMY ++GTTD+  L+ +GFPA MQTWLWLA FA+F+VK+PMWPVHTWLPDAHV+
Sbjct: 180 TMLAIMAMYWQSGTTDMTELLKYGFPAGMQTWLWLACFAAFSVKMPMWPVHTWLPDAHVQ 239

Query: 241 APTAGSVILAGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTSLVALVQED 300
           APTAGSVILAGV+LK+G YGF+RFS+ M PLAS  FAPF+F LSV+ +IYTSLVA++Q+D
Sbjct: 240 APTAGSVILAGVMLKLGGYGFIRFSLSMFPLASDYFAPFVFTLSVLAIIYTSLVAMMQDD 299

Query: 301 MKKLIAYSSIAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVVYDRLHTRE 360
           +KKLIAYSS+AHM +VT GIFA N   V+GA++QMLSHG+VSGALFLCVGVVYDRLHTRE
Sbjct: 300 IKKLIAYSSVAHMGYVTMGIFAANVQGVQGAIFQMLSHGIVSGALFLCVGVVYDRLHTRE 359

Query: 361 ISRYGGLAKNMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVALFIATGVI 420
           IS YGGL  NMP+YA+ FM+F MA++GLPGT GF+GEFL ++GVF+ +T VALF ATGVI
Sbjct: 360 ISAYGGLVNNMPKYAVAFMIFTMANVGLPGTSGFVGEFLTLIGVFRANTLVALFAATGVI 419

Query: 421 LGAAYMLYLYRRVIFGKLEKEDLKGLLDLNRREVAIFAPLLVLVLWMGVYPSTFLDFMHT 480
           L AAY L+LYRRVIFG LEKE LK +LDL+ RE  I  PL+ L ++ GVYP+   D    
Sbjct: 420 LSAAYALWLYRRVIFGALEKESLKSMLDLSTREKVILYPLVALTIFFGVYPAPVFDATAA 479

Query: 481 SVADLVSTYETALTAA 496
           SV  LV+ Y  AL AA
Sbjct: 480 SVDLLVNNYTAALQAA 495