Pairwise Alignments

Query, 392 a.a., NADH dehydrogenase I, D subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

 Score =  315 bits (806), Expect = 3e-90
 Identities = 159/382 (41%), Positives = 225/382 (58%)

Query: 11  LNFGPQHPAAHGVLRLVLELSGEVIERADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDY 70
           LN GP HP+AHG  R+VL+L GE I    P IG  HRG EK+ E +++   +PY DR+DY
Sbjct: 212 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDY 271

Query: 71  ACPMNQEHAYVLAVEKLLGITVPPRAQYLRTLFNEVTRLINHIMNTTSMALDIGAMTPLL 130
              +     YVLAVEKL GI VP +   +R +  E  R+ +H++   +   D+GAMTP+ 
Sbjct: 272 LGGVMNNLPYVLAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQDVGAMTPVF 331

Query: 131 YGFEEREHLLEFSERASGARMHAAWFRPGGVARDVPPDLLEDILKFCDSFPKYLDDVEHL 190
           + F +R+      E  +G R+H AW+R GGVA D+P    + +  F +  PK LD+    
Sbjct: 332 FTFTDRQRAYTVIEAITGFRLHPAWYRIGGVAHDLPRGWDKLVKDFVEWLPKRLDEYTKA 391

Query: 191 LDENRIFKQRTVDIGKVTAQQALDWGFTGPVLRGCGVPWDLRKSQPYDAYAAMDFDIPTG 250
             +N I K RT+ +     ++AL+WG TG  LR  G  +DLRK++PY  Y   +F++P  
Sbjct: 392 ALQNSILKGRTIGVAAYNTKEALEWGTTGAGLRATGCNFDLRKARPYSGYENFEFEVPLA 451

Query: 251 ANGDCYDRYLVRMAEQRQSIRIMRQCIEKMPDGPVKAVDHKVTPPSRGEMKSSMEALIHH 310
            NGD YDR +VR+ E RQSIRI+ QC+  MP+GP KA     TPP +      +E LI H
Sbjct: 452 HNGDAYDRCMVRVEEMRQSIRIIDQCLRNMPEGPYKADHPLTTPPPKERTLQHIETLITH 511

Query: 311 FKLFTEGFKVPEGETYTAVEAATGEFGVYLVSDGTNRPYRCKIRSPGYVHLQGLDLMSRG 370
           F   + G  +P  E++  +EA  G    YL SDG    YR +IR+P Y HLQ +  + +G
Sbjct: 512 FLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKG 571

Query: 371 HMLADVVANIGSIDVVFGEIDR 392
            M+AD++A +GSID V  ++DR
Sbjct: 572 SMVADLIAYLGSIDFVMADVDR 593