Pairwise Alignments

Query, 527 a.a., Cl- channel, voltage gated (NCBI) from Rhodospirillum rubrum S1H

Subject, 598 a.a., Voltage-gated ClC-type chloride channel ClcB from Xanthobacter sp. DMC5

 Score =  190 bits (482), Expect = 1e-52
 Identities = 163/522 (31%), Positives = 251/522 (48%), Gaps = 27/522 (5%)

Query: 5   SPGVLFRLRRLL-RTQSLV------LGALAVGIGLLVG-AGTVAFREAIDLVQTLFYGGD 56
           +P     LRRL+ + QS+V      L  +A  +G+L G A ++       + + L++   
Sbjct: 13  APAERAALRRLVDQAQSIVRARETSLVLIAAIMGVLAGVAASIMSATTQWMHEVLYWLAP 72

Query: 57  DLYLARLARSLPGWLVVLGPTAGGLLVGLYYAKVMPGGKPQGVAQVIGAVARTGGRMRAG 116
              L+        WL+++ P  GG  +GL  A  +   +       I A A  GGRM   
Sbjct: 73  GERLSSSPALASPWLILV-PAVGGAAMGLI-ALALKRWRRHPFVDPIEANALHGGRMSLT 130

Query: 117 DGVLAACGSALSLGCGASVGREGPAVHLGAALAAGLAGRLRLGPGLARTVLGCGVAAAVA 176
           D ++ A  + +S G GAS+G E     +G+ +A+ L    +L     R ++G G AA + 
Sbjct: 131 DSIIVALQTMVSNGFGASLGLEAGYSQIGSGIASRLGLTFKLRRNDLRILVGAGAAAGIG 190

Query: 177 ASFNAPIAGALFAGEVVIGHYALSAFAPIVVSSVVATVLSRGWFGDFPAFILPHLTLASA 236
           A+F+AP+ GA +  E+VIG Y++ A AP++  +V A + +R          +P       
Sbjct: 191 AAFDAPLMGAFYGFEIVIGSYSIPAAAPVLAGTVSAVMTARLLGAHVEPLHMPLDPNLGP 250

Query: 237 WEFPAFVVLGGLCGLVAVAFMRGVFLAGGLASALRLPVVLRPMVAGALVGLLALVLPEVL 296
            +    + LG     VA+  MR V     L    R+P  LRPMVAG  +G LAL  P+VL
Sbjct: 251 VDILPILFLGLAAAAVAIVIMRLVTTVETLFGMSRIPAPLRPMVAGIGIGALALYSPQVL 310

Query: 297 GVGYEATDQVLKGAYHLDLLLPLILAKLAASVICLGFGFGGGVFSPSLTLGALVGGAFGL 356
             G+ A    +  A    + +   L K+ AS + +G GF GG+F  SL LGAL+G  +G 
Sbjct: 311 SDGHGALHTQVGSAVTASVAIVFGL-KILASALSIGSGFRGGLFFASLFLGALMGKLYGG 369

Query: 357 AIALVAP---VSASGAYALIGMGALSAAVLGAPISTTLIVFELTGDYALSVGTMVAAVVA 413
            +AL  P   +  S A A++GMGAL+  V+G P++ + +V E+T D +LS   M AAVV 
Sbjct: 370 LLALAFPGFHLDPSVA-AVVGMGALAVGVIGGPLTMSFLVLEMTRDISLSGFVMAAAVVT 428

Query: 414 GALSRQICGHLSFFRWQLAKQGIDLEVPKAEGVLRVLRIGDLTWSAPPQRPAGGAALVSV 473
               R+  G+ SF  W+L  +G  +   +  G +R L +  +  +  P  P  G      
Sbjct: 429 SLTVRETFGY-SFSTWRLHLRGETIRGAQDVGWMRDLTVAKMMRTDFPTFPQDG------ 481

Query: 474 TAEETLAVALARLRQSGAEGLVVVDDQGRPIGGLRETDLAWA 515
               TL    AR    G+  +VV+ D     GGL     A+A
Sbjct: 482 ----TLDALRARY-ALGSTRIVVLVDAAGGYGGLLRLSEAYA 518