Pairwise Alignments

Query, 1483 a.a., Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) from Rhodospirillum rubrum S1H

Subject, 593 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  199 bits (505), Expect = 9e-55
 Identities = 132/373 (35%), Positives = 199/373 (53%), Gaps = 11/373 (2%)

Query: 880  QIANMAKSRFLAVASHDLRQPLQTLTLLQGLLAKKVEGVQSRVLLARMDETLGAMSSMLN 939
            Q A+  K+RFLA ASHDLRQPL  + L   ++ KK++G        R+ + +G +   L+
Sbjct: 217  QRASEEKTRFLAAASHDLRQPLHAIALFGAVIEKKLKGSDEWDHAVRLMDAVGTLGDSLD 276

Query: 940  VLLDINQIEVGTVEAERVVFPINDLFDRVREELAYQARAKKLDWSVVSCGLSVTSDPRLL 999
            +LLDI++++ G V  +     +N LF  +      QA    L   + +    V SDP+LL
Sbjct: 277  ILLDISRLDAGEVAPQVRPVELNPLFLALNNVFVAQAADLDLQLRLRATPCWVLSDPQLL 336

Query: 1000 EQMIRNLLANALKYTKQGKVLLGCRRRSGSLSIEVWDSGIGIPPGELEAIFDEFHQVETP 1059
            ++++ NL+ NALKYT +G V++  R R   + I+V D+GIGI    L  IFDEF+Q++ P
Sbjct: 337  QRLLSNLVHNALKYTTRGGVVVAARARGPLVWIDVCDTGIGIADEHLGRIFDEFYQIDNP 396

Query: 1060 AQGQGRGLGLGLSIVRRLGDLLGHPIGVRSRLGKGSVFTINVAIAPAAAEKPSLPARRGA 1119
             + + +GLG+GLSIV+RL  LL HP+ VRSRL  GS F + V  A  A   P L A  GA
Sbjct: 397  GRDRTKGLGIGLSIVQRLSRLLAHPLQVRSRLHHGSRFRL-VLPAVTALGSPPLAALPGA 455

Query: 1120 AEVKVDADGQRTGEILIIEDDPDVRDLLDLLLKGEGHRTVAVAEGGQAVAL---AEGGSI 1176
                          +L+I+D+  +R  +  LL+  G    AVA    A A+   A  GS 
Sbjct: 456  PL-------PLPRRVLVIDDEAAIRQAVAGLLQAHGLSVDAVASEADAEAVLAHAAHGST 508

Query: 1177 RPDLILADYNLPNGVNGLGVSATLRDVLDRPIPVVILTGDISTRTLHDIARHRCVKLNKP 1236
              +++L D  L +G +GL  +  LR      + V+++TG+ + +    +       L KP
Sbjct: 509  PVEVLLCDVRLADGADGLAAAQRLRARFGPGLQVLLITGETAPQRQRQMRDSGLQVLLKP 568

Query: 1237 VKPGELTQTIARL 1249
            V    L Q +A L
Sbjct: 569  VAADRLLQALASL 581