Pairwise Alignments

Query, 583 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 655 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 62.8 bits (151), Expect = 4e-14
 Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 13/203 (6%)

Query: 301 AGEILRLGNDAFAASGDHQGTFLGELGKEVAAVDDLLGGFRAARTKADQIAASVSDATTR 360
           A E   +  +  AA+ +      GE+  +V+    +           D+I   +S AT R
Sbjct: 333 AAEQASVNVETVAAAAEEMSASQGEIAAQVSRSTQIAERAANDVHHIDEIVQGLSVATGR 392

Query: 361 LVSHIGTLRSLEADIRIMGLNTTLKCGRLGNAGKALGVIAQELRHYANEITTEASEVMAD 420
           + +  G +  + +   ++ LN T++  R G AGK   V+A E+++ AN+      E+   
Sbjct: 393 IGAIAGIINDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTAKATEEIGVH 452

Query: 421 LDQVVSITKALSDEAHQDRASDIAAVSAIMADSLALLGQVGQSLASALASLEHDGHVVAD 480
           +            +A QD + + A     + +++A + +   ++A+A+       H +A 
Sbjct: 453 I------------QAVQDVSRETAEAVRAIGETIATVHETASAIATAVEEQSAATHEIAR 500

Query: 481 LLEKTSART-AVHEEIAEVLRGA 502
            + + S  T +V E I EV  GA
Sbjct: 501 NVHEASIGTRSVTETITEVSAGA 523



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 63/305 (20%), Positives = 112/305 (36%), Gaps = 51/305 (16%)

Query: 142 LRLAQTSLDEFA-------GELAEVGRDLHVAINTQSVLEEQQTEAIRTIPRRLTRSIEA 194
           LRLA  SL   A         +A       V + T +   E+ + +   I  +++RS + 
Sbjct: 309 LRLAAESLTHVADGTSRNASSVAAAAEQASVNVETVAAAAEEMSASQGEIAAQVSRSTQ- 367

Query: 195 IGARCKTAVSTAFAVGQGSQRIGRRIGDAVMALQIGDITRQRIEHADYALGLLAAPPASL 254
           I  R    V     + QG      RIG   +A  I DI  Q           L A  A++
Sbjct: 368 IAERAANDVHHIDEIVQGLSVATGRIG--AIAGIINDIASQTN---------LLALNATI 416

Query: 255 EADEASHADVIDFFCQLQSRQLEDAADEFDMEIGRILMSLEDLALDAGEILRLGNDAFAA 314
           EA  A  A         + + L +   +   EIG  + +++D++ +  E +R   +  A 
Sbjct: 417 EAARAGEAGKGFAVVANEVKNLANQTAKATEEIGVHIQAVQDVSRETAEAVRAIGETIAT 476

Query: 315 SGDHQGTFLGELGKEVAAVDDLLGGFRAARTKADQIAASVSDATTRLVSHIGTLRSLEAD 374
             +        + ++ AA  +              IA +V +A+    S   T+  + A 
Sbjct: 477 VHETASAIATAVEEQSAATHE--------------IARNVHEASIGTRSVTETITEVSA- 521

Query: 375 IRIMGLNTTLKCGRLGNAGKALGVIAQELRHYANEITTEASEVMADLDQVVSITKALSDE 434
               G  TT             G  AQ++   AN++ T  +E+ +D+   +   +   + 
Sbjct: 522 ----GAGTT-------------GDSAQQVFATANDLNTRTAELASDIKDFLQALRQTGNR 564

Query: 435 AHQDR 439
              +R
Sbjct: 565 RQFER 569



 Score = 28.5 bits (62), Expect = 9e-04
 Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 10  IAGAIRTASTSTEARFLEIGGGLETSVEILTSLTQTFATLSDALKGETLARATRELSQIA 69
           +A  ++  +  T     EIG  ++   ++     +    +     GET+A      S IA
Sbjct: 431 VANEVKNLANQTAKATEEIGVHIQAVQDVSRETAEAVRAI-----GETIATVHETASAIA 485

Query: 70  SRVSSLAAAQNSEIESFVALTKLIATIESRVVRMGKSVRGVGILATNTKIAAAHIGDTGV 129
           + V   +AA +               I   V       R V    T     A   GD+  
Sbjct: 486 TAVEEQSAATHE--------------IARNVHEASIGTRSVTETITEVSAGAGTTGDSAQ 531

Query: 130 DFTSFANEIN-RTLRLAQTSLDEFAGELAEVG 160
              + AN++N RT  LA + + +F   L + G
Sbjct: 532 QVFATANDLNTRTAELA-SDIKDFLQALRQTG 562