Pairwise Alignments

Query, 262 a.a., Transcriptional Regulator, IclR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 277 a.a., helix-turn-helix domain-containing protein from Serratia liquefaciens MT49

 Score =  107 bits (267), Expect = 3e-28
 Identities = 74/248 (29%), Positives = 126/248 (50%), Gaps = 4/248 (1%)

Query: 12  DRLFVSSLDKAMRLLGAFSAERPEMGLGDLALAAGLDKSAAQRFAHTFHSLGYL-DKDPV 70
           D  F++SL + + ++ AF+ +R  M +  ++   G+ ++A +R  +T + LG++  +D  
Sbjct: 28  DPNFMASLARGLEVIQAFTPQRRLMSISQISQKTGIPRAAVRRCLYTLNKLGFVYAQDGK 87

Query: 71  TRRYRPSIKILDLTNAYLWANPLIRAAMPQLIDLRQKIGETVNLALLDGESIVYAIRLPN 130
               RP  +IL L +AYL A PL +A  P L  + Q + E+ ++A LDG++I+Y  R   
Sbjct: 88  NFELRP--RILTLAHAYLGATPLAKATQPVLKHISQLLNESCSIATLDGDNILYIARASA 145

Query: 131 ARTSFAATLIGRRAPALNTASGRVMIAGFDRQTRQACVETWPLTAHIPTTLLDRPTILGL 190
            R       IG R PA  T+ GRV+++          ++   L  +   T+     +   
Sbjct: 146 ERIMTIDLNIGSRLPAFATSMGRVLLSHLPPDKLDDYLQRISLVRYTQYTIGSIDKLRDE 205

Query: 191 VEEAAEKGYAISENEILLNERDIAAPIRIMGG-PRAAVQCSVSAMVWPRARIVADIAPAL 249
           +++   +GYAI++ E+ +  R IA PI  M G   AA+   V A   P + +   I P L
Sbjct: 206 LDKVRAQGYAINDQELEIGLRSIAVPIASMDGRVTAALNVGVQAGHVPLSELTDRILPIL 265

Query: 250 LDTANALS 257
           L+ A  LS
Sbjct: 266 LEGAQELS 273