Pairwise Alignments

Query, 596 a.a., Acyl-CoA dehydrogenase (NCBI) from Rhodospirillum rubrum S1H

Subject, 593 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  437 bits (1123), Expect = e-127
 Identities = 260/598 (43%), Positives = 353/598 (59%), Gaps = 19/598 (3%)

Query: 4   YKAPLRDMRYVLYDLFDGASLTTLPGYEEFTADLIDPVLEEAAKICEDVLQPLNRPGDEE 63
           Y APLR+M + + ++    ++   P +EE T DL++ +L+EAA     VL PLNRPGD +
Sbjct: 4   YIAPLREMLFAMKEVGGLDAICAQPDHEETTPDLVEAILQEAANYAAGVLDPLNRPGDVQ 63

Query: 64  GCVLENGVVRTPKGFPEAYRTFREGGWTSITCDPAHGGQGLPQVVNTFIEEMICAANLSF 123
           G    +G V    GF EA+ +F E GW  +      GGQGLP +V+T + EM  ++NL+F
Sbjct: 64  GARWHDGRVTPADGFREAWASFCENGWNGMPAATEWGGQGLPTLVSTAVLEMWKSSNLAF 123

Query: 124 GMYPGLSHGAYVALKQFGTEDQKARYLPALVDGTWTGTMCLTEPQCGTDLGLLRTKAVPD 183
            +   L+ GA  A+   G++  + R+L  +V+G WTGTM LTEPQ G+DL  LR++AV +
Sbjct: 124 SLCQMLTLGAVEAIAHHGSDALQRRFLAPMVEGRWTGTMNLTEPQAGSDLAALRSRAVHE 183

Query: 184 GEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGIKGISLFLVPKVLVTEEGALG 243
           G+  Y ++G KIFI+ G+HD+ ENI+HLVLARLPDAP G+KGISLFL PK LV ++G LG
Sbjct: 184 GD-HYHVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVNDDGTLG 242

Query: 244 DRNAVTCGALEHKMGIKASSTCVLNFDE---ATGWLIGEPHKGMRAMFAMMNTARLGVGV 300
           +RN + C ++EHKMGI  S T  ++F +   A G+L+GEPH+G+  MF MMN ARL VG+
Sbjct: 243 ERNDLACTSIEHKMGIHGSPTASMSFGDSGGAIGYLVGEPHQGLACMFTMMNHARLNVGL 302

Query: 301 QGLGLAEASYQGAVAYARDRLQGRS-PSGVKAPDKPADPLIVHPDVRRMLLTQRAIVEGG 359
           +G+G++E +YQ A AYA +R+QG+   SG  A       +  HPDVRRML+  +A  E  
Sbjct: 303 EGVGISERAYQRARAYALERVQGKPLISGSTA-------IAGHPDVRRMLMDMKARTEAM 355

Query: 360 RALAAWVGLALDRQHHAGDPATRAEAGEFVALMTPVVKALLTDLGSEATNLGVQVFGGHG 419
           RALA +    +DR     D   RA+A   V L+ PVVK   TD     T+ GVQV GG G
Sbjct: 356 RALAYFCAGQMDRAAGHADAQERAQAQALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMG 415

Query: 420 YIREHGMEQYIRDCRITQIYEGTNGIQALDLVGRKLPENAGRNLRRFFHPVADYIEARL- 478
           Y+ E G  Q++RD RIT IYEGT GIQA DL+GRKL    GR L+     + D    RL 
Sbjct: 416 YVEETGASQHMRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRI-DGDARRLV 474

Query: 479 --DDDTLAEFVGPLAKTFVRLQQATA-QVARVGMTKPAEAAAAATDYQRLLGFTALAYLW 535
              D  LA+    LA     L +A    +A  G  +PA+ AA A  + RL G     +L 
Sbjct: 475 ESPDAVLAQIGRALAAAAQALDEAVDWLLAHDG--QPAQCAAGAVPFLRLAGTVIGGWLS 532

Query: 536 ARMAELSLPKAGTAEDNDAFHSAKVATARVFMERLLPQTSGLFATIMAGGRSLEAFPD 593
           ARMAE +  +      +  F   K ATA  +   +L Q   L   +  G  S  A  D
Sbjct: 533 ARMAEAATAQLAAGAGDAGFLGTKRATASHYAAHVLVQAPMLRDIVTGGAASTLALAD 590