Pairwise Alignments

Query, 632 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  134 bits (336), Expect = 3e-35
 Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 13/296 (4%)

Query: 331  AEGEERMRGFIMA-ARDAVVIIDQKGIISEFNPSATELFGYDVEEVRGQSVNMLMPATYA 389
            AE + RM   +   +  A++I D  G I + N + + + GY V +V  Q  NML   T  
Sbjct: 718  AEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSDVLDQLPNML---TVD 774

Query: 390  RDHDGHLRKG-KPSGQRAIGRGREMIGRRKNGSEFPIELTVGTQSFDGT---RVHIGVIR 445
               + HLR   K   Q +   G   + +R+NG  +P  + + T  FD       ++    
Sbjct: 775  EQQEAHLRYVLKQLHQHSTWEGEVWL-KRRNGEHYPAWVGI-TAVFDDEGDLASYVCFFS 832

Query: 446  DITERKATEETLRRLANIDGLTGVLNRRSFTEESELLLSLANRHGRRLSMMIVDADHFKG 505
            DI+ERKA+E+ + RLA  D LT + NR  F +     L  A R    + +M +D D FK 
Sbjct: 833  DISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKP 892

Query: 506  VNDTYGHDAGDRVLKALTGEIAGVLRKTDLLGRIGGEEFAILL-PETDQEGAEGLAWRVV 564
            +ND+ GH AGDR+LK +   + G + + D + R+GG+EF +LL P  ++E A   A  V 
Sbjct: 893  INDSLGHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIHVA 952

Query: 565  LAIRALEVP--LPEGGVLKVTVSVGVSCRNTEAATFDWMLKEADTALYAAKHGGRD 618
              I A  V   + EG    VT S+G++    +      ++K ADTA+Y AK  G++
Sbjct: 953  EQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKN 1008



 Score = 35.8 bits (81), Expect = 1e-05
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 25/158 (15%)

Query: 325 ERTRQLAEGEERMRGFIMAARDAVVIIDQKGIISEFNPSATELFGYDVEEV---RGQSV- 380
           E +  L + E+R R    +  D +   D +  ++  +PS   + GYDV+ V     QS+ 
Sbjct: 577 EASESLRDSEQRYRMLAESISDVICSTDSQLALNYISPSVNAVLGYDVDWVFKNGWQSII 636

Query: 381 --NMLMPATYARDHDGHLRKGKPSGQRAIGRGREMIGR--------RKNGSEFPIELTV- 429
                +   Y+   +     G P    A+ + R+ I          R +G + PIEL + 
Sbjct: 637 ANPQQLTGIYSLMEEVSRALGDP---EALNKLRDEIQTQLFLFDCLRADGRKVPIELRMV 693

Query: 430 ----GTQSFDGTRVHIGVIRDITERKATEETLRRLANI 463
                  +F+G    +GV RDI++++  E+ LR  A +
Sbjct: 694 LVWDEHGAFEGI---LGVGRDISQQRRAEKDLRMAATV 728