Pairwise Alignments

Query, 811 a.a., Primosomal protein n (NCBI) from Rhodospirillum rubrum S1H

Subject, 739 a.a., primosome assembly protein from Pseudomonas putida KT2440

 Score =  443 bits (1139), Expect = e-128
 Identities = 308/808 (38%), Positives = 405/808 (50%), Gaps = 93/808 (11%)

Query: 21  AEPVVAVLLPLPLAGAYDYKVPAGMARPAV--GTLVRVPLGRREEIGV-VWGAGAGETPP 77
           ++ ++ + LP PL   +DYK PA MAR  +  G  +RVP GRRE IGV +      E P 
Sbjct: 2   SDVILRLALPSPLRRLFDYKAPASMARLTLTPGMRIRVPFGRREMIGVLIEVCTQSEVPA 61

Query: 78  ERLKPLIGFPE-CPPLPAPLRAFIDWVAAYTVQPPGAVLRMALSVPAALEAPPPALGWRR 136
           ++LKP     +   P+PA L     W A Y     G  L  AL     L     A   R+
Sbjct: 62  DKLKPASALLDPVSPIPASLFKLCLWTAQYYQHSLGDTLSWALPT---LLRQGEAAEMRQ 118

Query: 137 PSAGQRAAGQRAEGQGPLPGGARLSPGRQRVLAVLDDHPGLPFAGADLAREAAVGPAVVA 196
                 A G R E     P  AR +P ++  L  L  HP    A + LA+      ++  
Sbjct: 119 ERFWHIAPGARLED----PRIAR-APRQRDALKTLAQHPH-GVAHSLLAKLNLNKDSLDL 172

Query: 197 AMAKAGLLEAVTRSN-------EWSPQAPDADRPGPLLSADQQAAADGLRTALDQGFSGL 249
            +AK  L++  TR +        W  Q      P   L+ +Q+ A D +      GF   
Sbjct: 173 LLAK-DLVQIETRRHLPALRHEHWLAQ------PELPLNEEQREAFDAVCEGFG-GFGAF 224

Query: 250 LLEGVTGSGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQWHSQM 309
           LL GVTGSGKTEVY + I ETL  G+QALVL+PEI L  Q   RF  RF A     HS +
Sbjct: 225 LLAGVTGSGKTEVYLQLIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAV 284

Query: 310 GAAARRRAWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPYNARDM 369
               R  AW A   G A +++G RSALF P  + GLII+DEEHD ++KQ+EG+ Y+ARD+
Sbjct: 285 NDRERLDAWLAARDGEADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDL 344

Query: 370 AVVRARLGGFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLRRAPPQ 429
           A+VRA     P +L SATPSLET+ NA  GRYR L + +R GGA  P +  LD+      
Sbjct: 345 ALVRAHQENIPILLGSATPSLETLHNALTGRYRLLRMNQRAGGARPPRMLRLDV------ 398

Query: 430 KWLPTDFAGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARLGWLSP 489
           K LP D                                                   +S 
Sbjct: 399 KSLPLDSG-------------------------------------------------ISG 409

Query: 490 PLITAVEETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGRLRCHH 549
           PL  A+ +TL AG+QVL+FLNRRG+AP  LC  CG   +CPRC A +  H+R G LRCHH
Sbjct: 410 PLQQAIRQTLEAGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRSGVLRCHH 469

Query: 550 CGYQQPIPETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPKEAAAL 609
           CGY + +P  CP C   D L P G G ER  E     FP   +     D+         L
Sbjct: 470 CGYDERLPHQCPQCNHVD-LRPVGAGTERAEERLKVLFPDYPILRVDRDSTARKDAMHNL 528

Query: 610 ATRIANHDIDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLHQVAGR 669
            + I      +++GTQ++AKGHHFP +TLV ++D D GL  GD RASER  QL+ QVAGR
Sbjct: 529 FSTIQRGQPSILVGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAGR 588

Query: 670 AGRAERPGRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVALVIS-- 727
           AGRAE PG+V+IQT    HP++  L       F E    ER+A  +PP+  L  L     
Sbjct: 589 AGRAEEPGKVIIQTHLADHPLLVQLTEQGYFAFAEQALDERRAAGLPPYSHLALLRAEAH 648

Query: 728 --GEDSARVQAVAAALGR--AAPMGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGVKVQ 783
             G+    +    AA  R  A    PG+++LGPVPAP+    GR R +LL++A     + 
Sbjct: 649 KPGQAEGFLDEACAAAERLVAEQRLPGIELLGPVPAPMERRAGRFRAQLLIQANTRAPLH 708

Query: 784 PVVRHW-LSLVSIPPG--VKVQVDVDPI 808
            ++  W L L  +P G  V+  +DVDP+
Sbjct: 709 RLISAWLLVLEQLPSGRQVRWSLDVDPV 736