Pairwise Alignments

Query, 330 a.a., Phage integrase (NCBI) from Rhodospirillum rubrum S1H

Subject, 302 a.a., tyrosine recombinase XerC from Dickeya dianthicola ME23

 Score =  174 bits (440), Expect = 3e-48
 Identities = 117/304 (38%), Positives = 159/304 (52%), Gaps = 12/304 (3%)

Query: 29  SDLRPSLVAWLGWLQGERRASRHTLDAYGRDLAAFLTFLRDYRGEEPGLATLASLGPADF 88
           S L     A+L +L+ ER+ S  T  +Y   L   +  L        G+A   +L  A  
Sbjct: 5   SPLSAPAEAFLRYLRVERQLSPLTQSSYAHQLQVIIDML-----SASGIADWQALDAAGV 59

Query: 89  RAYMAARLTQGLSRPSMARALSTLRNLFRWLDREGVLRNGAIATIRSPRQPQAVPKALSE 148
           RA +A     GL+  S+A+ LS LR+   WL   G L+      + +P+  + +PK +  
Sbjct: 60  RAVVARSKRAGLNAASLAQRLSALRSFLDWLVGRGELKANPARGVPAPKAGRHLPKNMDV 119

Query: 149 SEALDALSVASDLQDDPWLAKRDLALFTLLYGCGLRLGEALDLDRG--DLPSGEVMRITG 206
            E    L +  DL D   LA RD A+  ++YG GLRL E + LD G  DL SGEV  + G
Sbjct: 120 DEVSRLLDI--DLSDP--LAVRDRAMLEVMYGAGLRLAELVGLDCGHVDLDSGEVW-VMG 174

Query: 207 KGRKERLVPLLPVVVEALADYLAACPFAGGPDDPLFLGSRGKRLNPGVVQRQMRRLRGFL 266
           KG KER +P+    V  L  +LA         D +F+ S GKR++   VQ++        
Sbjct: 175 KGSKERKLPIGATAVTWLRHWLAIRDIYAPEGDAVFISSLGKRISMRNVQKRFAEWGVKQ 234

Query: 267 GLPETATPHALRHSFATHLLAQGGDLRTIQELLGHASLSTTQRYTKVDAGTLVGLHGATH 326
           G+     PH LRHSFATH+L   GDLR +QELLGHA+LSTTQ YT +D   L  ++ A H
Sbjct: 235 GVNSHVNPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQHLASVYDAAH 294

Query: 327 PRAR 330
           PRAR
Sbjct: 295 PRAR 298