Pairwise Alignments

Query, 445 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

Subject, 558 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  125 bits (314), Expect = 3e-33
 Identities = 138/445 (31%), Positives = 186/445 (41%), Gaps = 32/445 (7%)

Query: 24  GEIDQAAAHLQAAAQLCPDEPMIWALLGEVLLLLDRPQDGLGALDRALALAPEDPRPRFH 83
           G + QA A  +    L P   M     G VL  L   +    AL R   LAPE      +
Sbjct: 120 GALKQAEAAFRGVGLLVPALAMAHVNRGAVLHALGCQEMAEVALARGRRLAPEAVEAVLN 179

Query: 84  RARAFERLDRLAEALADQEALAILCANKAEVWHNLGLLRRAGGDPSGAEAAFGRALALEP 143
            A       RL +       +  L  +  + +      R   G P    AA+ RAL +E 
Sbjct: 180 SALVAIAQGRLPDVERYGRRVIALAPDSVQGYALFANARVHLGRPQDGVAAYNRALDIES 239

Query: 144 SRAESAL--ALAHSLLGRAA--WAEGFAHYEARLSLPGWQRPAPLPGRRWRGED-PAGRT 198
             +E  +   +A  LLG  A  W +  A +E   S PG     P    RW G   PAGR 
Sbjct: 240 DNSELKVNRGVARLLLGEMAGGWDDLAARWETTAS-PGVGDDLP----RWSGSAIPAGR- 293

Query: 199 LLVSAEQGLGDGVQFLRYLP-LIKGAGKVIVECHPPLRRLIA------------AQPGVD 245
           LLV  + G+GD + F   +P L++        C   L  L+             A P V 
Sbjct: 294 LLVVGQAGVGDEILFASLIPDLVESGIACRFVCDTRLVSLLRRSLKGTEVVGRDADPSVM 353

Query: 246 ATIAF-GEAIPDLGAEGLTIPLASLALPLAGGAPLGERIPY-VSKPRLRPQGDRPRIGLA 303
           AT A   +++  + A  L   L       AG  P     P  ++  R R +  +  IGL+
Sbjct: 354 ATPALVDDSVARVPASDLPRYLRRRPEDFAGQRPYLVADPQRIAALRARHRDVQLCIGLS 413

Query: 304 WRS--SDRAELRRDPPLAALAALAAIPAVDWVSLQFAPTDYPALPLDLRPMASVD---DL 358
           WRS  S    L  +  +AALA   A      +SLQ+   D       L    SVD   DL
Sbjct: 414 WRSVASTERSLGLEQLVAALAPGVAAAGGRLISLQYGVDDQERRIAGLFHETSVDPSGDL 473

Query: 359 DDTAALIADLDLVISVDTAVAHLAGAMGKPLWVLLGPRADWRWTASAQSSPWYPSCVPFF 418
           D  A+L+A +DLVI++D   AH+AG +G P WVLL     W W  +A +SPWYPS   F 
Sbjct: 474 DGFASLVAAMDLVITIDNTTAHMAGGLGVPGWVLLPFMPAWFWGGAAATSPWYPSLRLFR 533

Query: 419 HGAEG-WPGVIAAVSERLKAAFNGP 442
             A G W GV+  V   L++    P
Sbjct: 534 QTAPGDWRGVLGEVGRALRSVGGTP 558



 Score = 38.1 bits (87), Expect = 7e-07
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 4   KAVADRTIEG-LTRAGAAMAAGEIDQAAAHLQAAAQLCPDEPMIWALLGEVLLLLDRPQD 62
           + +A   +E  L  A  A+A G +     + +    L PD    +AL     + L RPQD
Sbjct: 167 RRLAPEAVEAVLNSALVAIAQGRLPDVERYGRRVIALAPDSVQGYALFANARVHLGRPQD 226

Query: 63  GLGALDRALALAPEDPRPRFHRARAFERLDRLAEALADQEA 103
           G+ A +RAL +  ++   + +R  A   L  +A    D  A
Sbjct: 227 GVAAYNRALDIESDNSELKVNRGVARLLLGEMAGGWDDLAA 267