Pairwise Alignments

Query, 481 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 455 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

 Score =  255 bits (651), Expect = 3e-72
 Identities = 170/418 (40%), Positives = 234/418 (55%), Gaps = 39/418 (9%)

Query: 61  GVAFLRGVRARWPE-PVRLILAEAAAAREMALAVD--EAWIHQSIVKPWTAETLAQTLGN 117
           G+   R ++AR  + PV L+        ++A+AVD      +  + KP+ +E L  ++ +
Sbjct: 64  GLELFRRLKARDADLPVILVTGHG----DIAMAVDAMREGAYDFLAKPYASERLVASIRH 119

Query: 118 AVRLYRLRRDNKAVSLRMRDAPGLHDRAGERRHRAAGRDQGFDSLLHAAGSPLAVAIALA 177
           A+   RL  +N+ +                   RA    Q  D  L    + +A    + 
Sbjct: 120 ALDRRRLVLENRELK------------------RAVATTQD-DLPLLGTSAVMARLRQML 160

Query: 178 RKVARFDISVLLTGESGTGKELLARAIHRGSPRAARRFVVENCGALPDQLLESELFGCKK 237
           R++A  D+ VL+ GE+G+GKE++A A+HR S RAAR  V  NCGALP+ ++ESELFG + 
Sbjct: 161 RQIADADVDVLVEGETGSGKEVVATALHRWSRRAARPLVAVNCGALPETVIESELFGYEA 220

Query: 238 GAYTGAHEDRVGLFELADGGTIFLDEIGETSPAFQVKLLRVLQEGEIRPLGSSLTRKVDV 297
           GA+TGA + RVG  E A GGT+FLDEI   SPA QVKLLRVL+  EI PLG++ TR+VD+
Sbjct: 221 GAFTGAVKKRVGRIEHAHGGTLFLDEIEAMSPALQVKLLRVLEAREIAPLGTNETRRVDI 280

Query: 298 RVIAATNRDLESEVAKGRFRRDLFYRLAGFPLHLPALRERPMDVPLLAEAFMGESMRFLG 357
           RV+AA+  DL + V +G FR DL+YRL    + +PALRER  DVPLL   F+  +     
Sbjct: 281 RVVAASKVDLPALVKQGSFREDLYYRLHVAAVRIPALRERRGDVPLLFGHFLARAAERFN 340

Query: 358 KPVEGLSDGALTRLRRHDWPGNVRELQNEIQRMIALADGPLLTEDLASPKVGAARAEALG 417
           +P   L  G L  L  HDWPGNVREL +  +R +AL         L  P+  +A AEA G
Sbjct: 341 RPPPELDAGVLRHLAEHDWPGNVRELVHYAER-VALG--------LVEPEQPSAPAEAGG 391

Query: 418 GGVAASGPLKERVEALEAAVIAEGLARPGCTLSRLAADLGLSRVGLRAKMRRYGLDQA 475
           G     G L ERV+A EA  I   L      +    A LG+ R     K+RR+G+DQA
Sbjct: 392 G----KGTLPERVDAFEAQEIRAALEANKGDVQATVAALGIPRKTFYDKLRRHGIDQA 445