Pairwise Alignments
Query, 431 a.a., Ammonium transporter (NCBI) from Rhodospirillum rubrum S1H
Subject, 498 a.a., Ammonia channel from Xanthobacter sp. DMC5
Score = 422 bits (1086), Expect = e-123
Identities = 224/473 (47%), Positives = 298/473 (63%), Gaps = 51/473 (10%)
Query: 4 AFTFLPAALVALLAPALAYAQDAAPTLDSGNTAWMLTSTALVLLMTIPGLALFYAGMVRK 63
A T PA A PA A AAPT++ G+ AWMLTS LVL+M++PGL LFY G+VR
Sbjct: 26 AQTAPPATDAATAVPAAA----AAPTVNKGDVAWMLTSALLVLMMSVPGLFLFYGGLVRA 81
Query: 64 KNVLATMMQSFIITALVSVVWMVAGYSIAFGTGNAYFGDFSKFLLSDISIDSLNGTF--- 120
KN+L+ +MQ +V ++W++ GYS+AF G+ + G FSK LS ++ +SL TF
Sbjct: 82 KNMLSVLMQVAYSVCIVGLIWVLYGYSLAFTGGSPFIGGFSKAFLSGVTGESLAATFSVG 141
Query: 121 ---PETVFVVFQMTFAIITPALITGAFAERMKFSAMLWFIGLWVLIVYAPICHWVW---- 173
PE V++ FQMTFA+ITPALI GAFAERMKFSA++ F+ LWV VY PI H VW
Sbjct: 142 VAIPEWVYIAFQMTFAMITPALIFGAFAERMKFSAVVLFVPLWVTFVYFPIAHMVWYWAG 201
Query: 174 -------------------------------SSSGFLFNAGVLDYAGGTVVHINAGVAGL 202
+ SG++F G +D+AGGTVVHINAG+AGL
Sbjct: 202 PDAIDAAAKALAAAADGTAKAAAQQALDAVNADSGYIFQLGAIDFAGGTVVHINAGIAGL 261
Query: 203 VCALVLRRRAGFGSENMAPYNLSLAVIGAALLWVGWFGFNAGSAVAADGRAGMAMLATQL 262
V +++ +R G+G E ++P++L+L ++GA+LLWVGWFGFNAGS + A+ +AM+ T +
Sbjct: 262 VACIMVGKRLGYGKEALSPHSLTLTMVGASLLWVGWFGFNAGSNLEANATTALAMMNTFI 321
Query: 263 GAAGATLSWIAAEWLVRGKPSVLGAVSGAVAGLVAITPASGFVLPGGALVIGLVAGVVCF 322
A +SW+ EWLV+GKPS+LG SG VAGLVA+TP SGF G+LV+GLV +CF
Sbjct: 322 ATCAAGMSWMFVEWLVKGKPSMLGLASGIVAGLVAVTPPSGFAGIMGSLVLGLVVSPICF 381
Query: 323 WGATWLKKTLGYDDSLDAFGVHGIGGLVGALLTGVFAAQSVGGEAAVGLLEG------NP 376
T +K LGYDD+LD FGVHGIGG+VGA+ TG+ + S+GG G
Sbjct: 382 IFCTAVKNALGYDDALDVFGVHGIGGIVGAIATGILVSPSLGGTGIYDYTTGAVAAYDMT 441
Query: 377 GQVLTQAWGCLATIVWTAVASYVILKVIDLAIGLRVSPEQESEGLDISLHGER 429
QV+ Q T+VW+ V + VIL VI + +GLR S + E EGLDI+ HGER
Sbjct: 442 AQVIAQLKAVGVTVVWSGVGTAVILFVISVIVGLRPSTDVEREGLDINEHGER 494