Pairwise Alignments

Query, 1052 a.a., Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 1042 a.a., Multidrug resistance protein MexB from Pseudomonas putida KT2440

 Score = 1198 bits (3099), Expect = 0.0
 Identities = 610/1026 (59%), Positives = 766/1026 (74%), Gaps = 3/1026 (0%)

Query: 1    MAQLFIKRPILAWVFAIFISIAGIIALPLLPVAQYPNVAPPQLSLYTTYPGASPQEIYQG 60
            M Q FI RP+ AWV A+FI +AG +A+P LPVAQYPNVAPPQ+ +Y  YPGAS   + + 
Sbjct: 1    MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPQVEIYAVYPGASAATMDES 60

Query: 61   VTRLIEEELNSVDNLIYFESTSDSTGGITINATFQPGTNLQQASVNVQNAIRSVASRLPA 120
            V  LIE+ELN  DNL+YFES S S G  TI ATF PGT+   A V+VQN ++ V SRLP 
Sbjct: 61   VVSLIEQELNGADNLLYFESQS-SLGSATITATFAPGTHPDLAQVDVQNRLKVVESRLPR 119

Query: 121  AVTAQGVTVEEVTAGFLMLITLTSTDGAVDEVGLGDYLNRNMLGELRRIDGVGKAQLFSA 180
             VT QG+ VE+V+ GFL+L TLTS DG +DE  L D L RN++ E+RR+ GVGKAQL+ +
Sbjct: 120  PVTQQGLQVEKVSTGFLLLATLTSEDGKLDETALSDILARNVMDEIRRLKGVGKAQLYGS 179

Query: 181  QRAMRVWIDPDKMVGLKLTVGDINTAITTQNAQVAAGQIGAAPNPVSQDLTATVLVKGQL 240
            +RAMR+WIDP K++G  LT  D+  AI  QNAQVA G IG  P+  +Q++TA V+VKGQL
Sbjct: 180  ERAMRIWIDPRKLIGFNLTPNDVAEAIAAQNAQVAPGSIGDLPSRSTQEITANVVVKGQL 239

Query: 241  TDIEEFGNIVLRANPDGSTVRLKDVARLEVGAESYNFSSRLNGQPSAAVAIQLSSTGNAV 300
            +  +EF  IVLRANPDGSTV + DVAR+E+GA+ Y + +RLNG+P+ A ++QLS   NA+
Sbjct: 240  SSPDEFAAIVLRANPDGSTVTIGDVARVEIGAQEYQYGTRLNGKPATAFSVQLSPGANAM 299

Query: 301  ATSAAIKAKLDELSRFFPSGVQYDVPYDTSPFVSASIQKVLMTLLEAVGLVFLVMFVFLQ 360
             T+  ++AK+ +L+R+FP GV+YD+PYDTSPFV  SI++V+ TL EA+ LVF VMF+FLQ
Sbjct: 300  ETATLVRAKMQDLARYFPEGVKYDIPYDTSPFVKVSIEQVINTLFEAMLLVFAVMFLFLQ 359

Query: 361  NFRYTVIPTLVVPIALLGTSAAMLATGFSINVLTMFAMVLAIGILVDDAIVVVENVERIM 420
            N RYT+IPTLVVP+AL+GT A MLA GFS+NVLT+F MVLAIGILVDDAIVVVENVERIM
Sbjct: 360  NLRYTLIPTLVVPVALMGTFAVMLAMGFSVNVLTLFGMVLAIGILVDDAIVVVENVERIM 419

Query: 421  AEEGLSPKAATNKAMTQITSAILGITLVLSSVFIPMAFFPGSTGIIYRQFSLTMVVSILF 480
            AEEGL PK AT KAM QI+ AI+GITLVL +VF+PMAF  GS G+IY+QFSL+M VSILF
Sbjct: 420  AEEGLPPKQATRKAMGQISGAIVGITLVLVAVFLPMAFMQGSVGVIYQQFSLSMAVSILF 479

Query: 481  SAFLALSLTPALCATFLKPIKQG-HHDKKGLGGWFNRKFDRLTAGYSRSVTGLVRRAGRV 539
            SAFLALSLTPALCAT LKP+ +G HH++KG  GWFNR+F+ ++ GY R V   ++R+GR 
Sbjct: 480  SAFLALSLTPALCATLLKPVAKGEHHERKGFFGWFNRRFESMSNGYQRWVVQALKRSGRY 539

Query: 540  MVVYLALVVGLGYLFVNLPSGFVPNEDQGYFLVDVQGPPEASANRTVASIKQIEEIFKGE 599
            ++VY  L+  LGY F  LP+ F+P EDQGY + D+Q PP AS  RT     QIE     E
Sbjct: 540  LLVYAVLLAVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASRMRTEQVAAQIEAHNAEE 599

Query: 600  SAVRDVLVIQGFSFSGSGANAAMVFVTLKDWKERGAGNTVDEITERVNMRLFALKDATSF 659
              V +  +I GFSFSGSG NAA+ F TLKDW ERGA ++   I +R  M    LKDA ++
Sbjct: 600  PGVGNTTLILGFSFSGSGQNAALAFTTLKDWSERGADDSAQSIADRATMAFTQLKDAIAY 659

Query: 660  ALSPPPIEGFGTTNGFSFRLQDRSGLGQQALSSAAAKLMAKAEQSPVLTGLRIEGLPDAA 719
            ++ PPPI+G G + GF FRLQDR G+G   L +A  +L+  A +S VLT +R   L ++ 
Sbjct: 660  SVLPPPIDGLGESTGFEFRLQDRGGMGHAELMAARDQLLESASKSKVLTNVREASLAESP 719

Query: 720  QVVLVINREKANTFGVTFADINSTITANLGSSYINDYPNAGRMQRVIVQAQDRDRLQADD 779
            QV L I+R +AN  GV+FADI + +   +GSSY+ND+PN GRMQRV+VQA+   R Q +D
Sbjct: 720  QVQLEIDRRQANALGVSFADIGTVLDVAVGSSYVNDFPNQGRMQRVVVQAEGDQRSQVED 779

Query: 780  LLKLNVRNAGGGMVPLSSFAIAEWQKGAPQIVGYNGYPTVRIAGEPVPGQSTGAAIAEME 839
            LL ++VRN  G MVPL +F  A W  G  Q+  YNGYP V I+GEP  G S+G A+AE+E
Sbjct: 780  LLNIHVRNDSGKMVPLGAFVQARWVSGPVQLTRYNGYPAVSISGEPAAGYSSGEAMAEVE 839

Query: 840  RLASELPEGFGFEWTGQALEEIKSGSQAPMLFGLSILFVFLLLAGLYESWSIPLSVMLVV 899
            RL ++LP G G EWTG +L+E  SGSQAP+L  LS+L VFL LA LYESWSIP +V+LVV
Sbjct: 840  RLVAQLPAGTGLEWTGLSLQERLSGSQAPLLMALSLLVVFLCLAALYESWSIPTAVLLVV 899

Query: 900  PLGAIGCVLAVMMRGMPNDIYFKVGLIAIIGLSAKNAILIVEFAKDYFAQGRSLFDSAVD 959
            PLG +G VLAV +RGMPND++FKVGLI +IGLSAKNAILI+EFAK    QG    D+AV 
Sbjct: 900  PLGVLGAVLAVTLRGMPNDVFFKVGLITLIGLSAKNAILIIEFAKHLVDQGVDAADAAVQ 959

Query: 960  AARVRFRPIVMTSLAFALGVVPLAIATGPSAASQNAIGTGVLGGIILGTILAIFFVPAFF 1019
            AAR+R RPIVMTSLAF LGVVPLAIA+G S+ASQ AIGTGV+GG++  T LA+ FVP FF
Sbjct: 960  AARLRLRPIVMTSLAFILGVVPLAIASGASSASQQAIGTGVIGGMLSAT-LAVVFVPVFF 1018

Query: 1020 VFVLKL 1025
            V V++L
Sbjct: 1019 VVVMRL 1024