Pairwise Alignments

Query, 486 a.a., Major facilitator superfamily MFS_1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  152 bits (383), Expect = 3e-41
 Identities = 118/404 (29%), Positives = 181/404 (44%), Gaps = 11/404 (2%)

Query: 32  LLLGGFITVFDLFVVNIAIPSMQRDLGATFAEIGFVIAGYELAFGVLLIAGGRLGDIHGR 91
           L L  F+ V D  + N+A+P++  +LG ++ +  +VI  + ++  + L   G L    G 
Sbjct: 21  LSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGE 80

Query: 92  RRLFAFGLLGFGLTSLLCGIAPNAASLIVARFLQGAAGAILFPQVYALLRVMYDDAGRRR 151
            +LF +  L F L S LCGIA +   L+  R LQG     L+P    LL  +Y  A R  
Sbjct: 81  VKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGM 140

Query: 152 AFGLLGMTLGMAAIAGQVLGGLIVESDLFGLGWRIIFLINLPISLGAALCVHTLPDSKAP 211
           A  LL M   +A IAG +LGG I +S      W  IF IN+PI L AA  V     ++  
Sbjct: 141 ALALLAMVTVVAPIAGPILGGWITDS----YSWPWIFFINVPIGLFAAAVVRQQMRTRPV 196

Query: 212 GASVVDWPGVGLAT--AGLLLLLVPLLEGPNSGW--PAWTWASFAASAALLAAFLAWERR 267
             S      +GL T   G+  L V L +G +  W   ++       S   LA F+ WE  
Sbjct: 197 VTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELT 256

Query: 268 AAHSAIDLGLFARRGFSIGAVVVLLIYSTATSLFLCFALLLQSGLGLTPFAAGALFAPAS 327
             H  ++L LF  R F IG +V++  Y+    + L     LQ+ +G T   AG   AP  
Sbjct: 257 DRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIG 316

Query: 328 VGFVAASLLAPKLVSRWGNAAIWGGALIYAAGIAWLIAMTSRLTGKEDALSLLPALILFG 387
           +  V  S    K   R+    + G A +    I     M +  T + D   +    +  G
Sbjct: 317 LLPVIMSPFVGKYAHRFDLRVLAGLAFL---AIGTSCYMRAGFTSEVDFQHVALVQLFMG 373

Query: 388 FGQGLSMTPLLNLVIGFVEDRHAGMAAGIIATMQQVGGAFGVSI 431
            G  L   P L++++  +        +G+   ++ +GG+F  S+
Sbjct: 374 IGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASL 417