Pairwise Alignments

Query, 462 a.a., PP-loop protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 429 a.a., tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain from Enterobacter asburiae PDN3

 Score = 98.2 bits (243), Expect = 5e-25
 Identities = 84/235 (35%), Positives = 104/235 (44%), Gaps = 13/235 (5%)

Query: 30  PEPAIAVGVSGGVDSLTLLAFAARWA-AERGGRCTAVCFDHGLRAASAGEARLVETTARS 88
           P   + VG SGG+DS  LL    RW   E   +  A+   HGL   +       E    +
Sbjct: 12  PYRQLLVGFSGGLDSTVLLHRLKRWRDREPDVQLRAMHIHHGLSPHAEAWVAHCEALCAA 71

Query: 89  LGAEAVVLRWAGPPPSSGVQEAARRARLDGLLGWCAGAGVLH----LLLAHHRDDQAETV 144
                +V R        G++  AR+AR      + A AG L     L+ A H DDQ ET 
Sbjct: 72  WAIPLIVERVTLAEEGLGIEAQARKAR------YAAFAGALRPGEALVTAQHLDDQCETF 125

Query: 145 LQRLGRGSGADGLAAMAALSSRGEARILRPFLEVPRAAIEASARRIGLVWAEDPSNHDPH 204
           L  L RGSG  GL+AM A S      +LRP L   RA++E  AR   L W ED SN D  
Sbjct: 126 LLALKRGSGPAGLSAMPARSEFAGTTLLRPLLGETRASLENWAREHQLNWIEDESNQDDG 185

Query: 205 YDRARLRAAAAPL--DQAGLSAKALAASAARLGDDRAFWARHLSALLAGATRACG 257
           YDR  LR    PL  ++    A A A SA    +  +     LS  LAG   A G
Sbjct: 186 YDRNFLRLRVLPLLGERWPHFADATARSAMLCAEQESLLDELLSDELAGLISADG 240



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 138 DDQAETVLQRLGRGSGADGLAAMAALSSRGEARILRPFLEVPRAAIEASARRIGLVWAE 196
           D+     L  L    GA  +A M A+S    A +LR +L   RAA+  S   +  +W E
Sbjct: 225 DELLSDELAGLISADGALAIAPMKAMSPVRRAALLRRWLAFHRAAM-PSRTMLSRIWDE 282