Pairwise Alignments

Query, 166 a.a., Biopolymer transport protein ExbD/TolR (NCBI) from Rhodospirillum rubrum S1H

Subject, 150 a.a., subunit of a proton-driven complex used for maintenance of outer membrane stability from Pseudomonas putida KT2440

 Score =  103 bits (258), Expect = 1e-27
 Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 17/144 (11%)

Query: 13  RKRSHQMSDINVTPMVDVMLVLLIIFMVTAPLLTTGVKVDLPRTSAPSLDQDN--QSLTV 70
           R +   ++++NV P +DVMLVLL+IFMVTAP+L  GVKVDLP+ S+ +L QDN  Q LT+
Sbjct: 5   RHKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVDLPKVSSEALPQDNNVQILTI 64

Query: 71  SVGADGTLYVQ-------DKVTDES-ELMARMQAITGV-------NPEARIYVRGDAGIN 115
           S+ AD T Y         DK  D++  L A   A+T +         + ++++RGD  ++
Sbjct: 65  SIKADKTYYWNLGSEVDTDKQMDKAMTLPAMTDAVTKIIAAGRDQGKQTQVFIRGDKAVD 124

Query: 116 YGRVMEVMGILRSAGYTKVALVTQ 139
           YG VM  MG L+ AG   V L+T+
Sbjct: 125 YGAVMGAMGGLQKAGVGNVGLITE 148