Pairwise Alignments

Query, 308 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

Subject, 320 a.a., Biopolymer transport protein ExbB from Pseudomonas putida KT2440

 Score =  147 bits (372), Expect = 2e-40
 Identities = 102/266 (38%), Positives = 143/266 (53%), Gaps = 11/266 (4%)

Query: 47  SSPPLPAAAPS---VPVASEILPNAS--GVGAAAPGATMGEKPSLSAWSMFWQADIIVKM 101
           ++P  PAAAP+    P A+   P A+   V A     ++G    LS W M+  ADI+VK+
Sbjct: 48  TAPATPAAAPADAPAPDATASNPAAADPSVQALVEDTSLGMAHDLSPWGMYKNADIVVKI 107

Query: 102 VMLSLVGASIWSWTIVFEKIVRLRDLNKKAEQFEEKFWSGGSLEDLFDRIGQRPRDPMTA 161
           VM+ L  ASI +WTI   K   L    ++      +     +L++  +   +      T 
Sbjct: 108 VMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSTTLKEASEVTNKEGTLAHTL 167

Query: 162 VFVAAMREWRHSAQRRNGAAGARAMLAQRVERVMGITQNRELETLERRLGFLASTGAVAP 221
           V   A+ E R SA  R    G +  ++ R+ER++  +      T+    G LA+ G+ AP
Sbjct: 168 VH-DALEEMRLSANARE-KEGIKERVSFRLERLVHASGR----TMSSGTGVLATIGSTAP 221

Query: 222 FVGLFGTVWGIMNSFHAIGMSNDTSLATVAPGIAEALFATALGLVAAIPAVIAYNKLSAD 281
           FVGLFGTVWGIMNSF  I  +  T+LA VAPGIAEAL ATALGLVAAIPAV+ YN  +  
Sbjct: 222 FVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLVAAIPAVVIYNVFARS 281

Query: 282 IDRYAGRLEAFSGEFGAILGRQLDER 307
           I  Y  ++   S +   ++ R LD +
Sbjct: 282 IAGYKAQVSDASAQVLLLVSRDLDHQ 307