Pairwise Alignments

Query, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

Subject, 343 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Xanthobacter sp. DMC5

 Score =  476 bits (1224), Expect = e-139
 Identities = 235/327 (71%), Positives = 281/327 (85%), Gaps = 1/327 (0%)

Query: 10  RLISGRRR-EGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHGPPGL 68
           RL+SG +R +   D+ LRPQ L++FVGQ Q R NL +F++AARARGEA+DHVLF GPPGL
Sbjct: 4   RLLSGEKRGDDAADSTLRPQLLSEFVGQAQARANLEIFIKAARARGEALDHVLFVGPPGL 63

Query: 69  GKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAIEEVL 128
           GKTTLAQI++RE+GVGFR TSGP+I KAGDLAAILTNLE RDVLFIDEIHRL+PA+EE+L
Sbjct: 64  GKTTLAQIMSREMGVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHRLSPAVEEIL 123

Query: 129 YPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLDFYET 188
           YPAMED++LDL+IGEGPAARSV+I LP FTLVGATTRSGLLTTPLRDRFGIP+RL FY  
Sbjct: 124 YPAMEDYELDLVIGEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGIPVRLQFYTV 183

Query: 189 DELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPVDAFI 248
           +EL +IV RG+R++G+A+  +GA E+ARR+RGTPR+AGRLLRRVRDFA VA    +D  I
Sbjct: 184 EELEKIVVRGARVMGIAIAPDGATEIARRARGTPRIAGRLLRRVRDFALVAEAERIDRKI 243

Query: 249 ADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIEPYLI 308
           AD AL  LEVD  GLDAMDRRYL+ +A+ YGGGPVGVDTLAAAL+E RD +E+++EP+L+
Sbjct: 244 ADRALLALEVDAAGLDAMDRRYLTVIAEFYGGGPVGVDTLAAALSEPRDAIEEIVEPFLV 303

Query: 309 QQGFIKRTPRGRMLTAIAWTHLGLTPP 335
           QQGFI+RTPRGRMLT  A+ HLGL  P
Sbjct: 304 QQGFIQRTPRGRMLTGAAFRHLGLAEP 330