Pairwise Alignments

Query, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

Subject, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

 Score = 61.2 bits (147), Expect = 5e-14
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 9/126 (7%)

Query: 23  AALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHGPPGLGKTTLAQIVARELG 82
           A LRP SL ++VGQ       G  ++ A  +G A+  ++F GPPG+GKTTLA+++A+   
Sbjct: 15  ARLRPSSLDEYVGQEHLLAR-GKPLREALEQG-ALHSMIFWGPPGVGKTTLARLLAQFCD 72

Query: 83  VGFRGTSGPMI-VKAGDLAAILTNLEP-----RDVLFIDEIHRLNPAIEEVLYPAMEDFQ 136
             F   S  +  VK    A  +   +      R +LF+DE+HR N + ++   P +ED  
Sbjct: 73  AHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQDAFLPYVEDGT 132

Query: 137 LDLIIG 142
           L L IG
Sbjct: 133 L-LFIG 137